Gene Information

Name : Kole_1506 (Kole_1506)
Accession : YP_002941200.1
Strain : Kosmotoga olearia TBF 19.5.1
Genome accession: NC_012785
Putative virulence/resistance : Unknown
Product : IstB domain protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 1614854 - 1615651 bp
Length : 798 bp
Strand : +
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: sfu:Sfum_2832 IstB domain protein ATP-binding protein

DNA sequence :
ATGAGCTACGAAAACGTACACAGCCTGTTGAAAGAACTGAAACTGGAAGGAATCTCCAGGGTACTGGATTCTTCTCTTCA
AAACTGGAGTAAAGGGGATAAAGACGTTCTCGAATTGATTGAAGAACTACTAATAGCCCAGAAGAAAGAAAACGAGAACA
AGAAATACATAACGGCTCTCAGATACAGCGGATTACCTTTCCACAAAACCCTGGAAGAATTCGATTTCAGTTTCCAACCC
AGTATAGACAGAAAACAGATAATGGAATTGAAGACCCTGAGATTCATGTACGAAAAAGAGAACGTGGTATTCCTTGGACC
TCCTGGAGTAGGGAAAACACACCTGGCGGTAGGTCTTGGAATGGAAGCCCTAAGGGAAGGAAAGAAAATATACTTTGTTA
ACGCAATAACATTGGTGGATCGATTAAAGAAAGCTTTTATTGAAAGACATCTGGAAAAAACCATTAGATTCTACAAATCC
CTTGACCTCCTAATAATAGACGAACTGGGATACCTGCCACTGGATACAGAAGGAGCGAAGCTATTCTTTGAACTAGTAAG
CCAGAAATACGAACAAGGAAGCATAATCCTGACATCCAACAGAAGCTTTACCGAATGGGACAAGATATTCGAAGACGAAG
TATTAGCAACAGCGGTATTAGATAGACTCTTACATCATTGTACAATTGTCAACATTCGTGGAAAAAGCTACAGACTGAAA
GAAAAACAGAAAACGGGGCTTGTTGGTATACAGACGACGATTGATAGAAGTGACAAACTACGCAAATCTGATCGATGA

Protein sequence :
MSYENVHSLLKELKLEGISRVLDSSLQNWSKGDKDVLELIEELLIAQKKENENKKYITALRYSGLPFHKTLEEFDFSFQP
SIDRKQIMELKTLRFMYEKENVVFLGPPGVGKTHLAVGLGMEALREGKKIYFVNAITLVDRLKKAFIERHLEKTIRFYKS
LDLLIIDELGYLPLDTEGAKLFFELVSQKYEQGSIILTSNRSFTEWDKIFEDEVLATAVLDRLLHHCTIVNIRGKSYRLK
EKQKTGLVGIQTTIDRSDKLRKSDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 1e-35 44
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-41 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-41 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 4e-41 42
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-41 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-41 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 1e-41 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-41 42
unnamed CAA21402.1 - Not tested HPI Protein 1e-41 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-41 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-41 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-41 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-41 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kole_1506 YP_002941200.1 IstB domain protein ATP-binding protein VFG1460 Protein 7e-36 44
Kole_1506 YP_002941200.1 IstB domain protein ATP-binding protein VFG1606 Protein 6e-42 42
Kole_1506 YP_002941200.1 IstB domain protein ATP-binding protein VFG1663 Protein 2e-41 42
Kole_1506 YP_002941200.1 IstB domain protein ATP-binding protein VFG1515 Protein 6e-42 42
Kole_1506 YP_002941200.1 IstB domain protein ATP-binding protein VFG1627 Protein 6e-42 42