Gene Information

Name : Kole_1279 (Kole_1279)
Accession : YP_002940978.1
Strain : Kosmotoga olearia TBF 19.5.1
Genome accession: NC_012785
Putative virulence/resistance : Unknown
Product : IstB domain protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 1359268 - 1359990 bp
Length : 723 bp
Strand : +
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bha:BH3999 transposase (26)

DNA sequence :
ATGAAAGAACTCATCGCTCAATACTGCAAAGAACTGAGATTGGGAAAAAGTATAGTGGAAAATTACCAAAAGATACAGGC
AGAAACCAACGAGGAATTCCTTCTGAAACTACTGAAGCTGGAGATTGAAAACAGACGGGTATCACGTAAAAATCGTTACC
TAAAACAGACAAATTTCGAGGTAATGAAAACCTTCGAAGGCTACAGTTTTGAAAACGTACAGATACCCAAGAGTATAACA
TTGGAAGAACTACAAGAAGGGAGGTTTCTGGAAAAGAAAGAGAACCTAATACTGTATGGTCCTGTAGGAACAGGAAAAAC
ACACATGGCAACAGCCATAGGTATCGCAGCCTGTAACCGGGAAAAGAAAGTCAGATTTTACAGAACGGCCACACTGGTAA
ACGAACTTGTGGAAGCAAAAAGCAACGGAACATTGAAGAGATTCTTGAAGACACTCAGAAAGACAGATTTGCTCATATGC
GACGAATGGGGTTACATACCTTTAGACCGAGAAGGAGCGCAACTTTTATTTCAAGTGATTGCGGAAAGATATGAGAGGAA
CAGCGTAATAATCACAACGAACCTTGAGTTCAGCAAATGGAATGGGATATTCTACGATGAGAAACTCACCAGTGCCATAA
TAGACAGATTGATCCACCATTGCCATTTACTGGTGTTTACAGGCAAGAGTTATCGATTGGAACATTCGAGTATTAAGGCT
TAA

Protein sequence :
MKELIAQYCKELRLGKSIVENYQKIQAETNEEFLLKLLKLEIENRRVSRKNRYLKQTNFEVMKTFEGYSFENVQIPKSIT
LEELQEGRFLEKKENLILYGPVGTGKTHMATAIGIAACNREKKVRFYRTATLVNELVEAKSNGTLKRFLKTLRKTDLLIC
DEWGYIPLDREGAQLLFQVIAERYERNSVIITTNLEFSKWNGIFYDEKLTSAIIDRLIHHCHLLVFTGKSYRLEHSSIKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4097 YP_006098380.1 putative transposase Not tested Tn2411 Protein 2e-34 43
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-33 42
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-31 41
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 3e-33 41
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 3e-33 41
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 3e-33 41
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 3e-33 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 4e-33 41
api84 CAF28558.1 putative transposase Not tested YAPI Protein 3e-33 41
unnamed CAA21402.1 - Not tested HPI Protein 4e-33 41
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-33 41
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 5e-33 41
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 5e-33 41
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 4e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kole_1279 YP_002940978.1 IstB domain protein ATP-binding protein VFG1663 Protein 7e-34 42
Kole_1279 YP_002940978.1 IstB domain protein ATP-binding protein VFG1460 Protein 1e-31 41
Kole_1279 YP_002940978.1 IstB domain protein ATP-binding protein VFG1606 Protein 2e-33 41
Kole_1279 YP_002940978.1 IstB domain protein ATP-binding protein VFG1515 Protein 2e-33 41
Kole_1279 YP_002940978.1 IstB domain protein ATP-binding protein VFG1627 Protein 2e-33 41