Gene Information

Name : EUBREC_0087 (EUBREC_0087)
Accession : YP_002936026.1
Strain : Eubacterium rectale ATCC 33656
Genome accession: NC_012781
Putative virulence/resistance : Virulence
Product : bacteriocin ABC transporter, ATP-binding protein, putative
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 84383 - 85096 bp
Length : 714 bp
Strand : +
Note : CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K09687 bacteriocin ABC transporter, ATP-binding protein, putative; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439

DNA sequence :
ATGGAAATGATGTTACAGACACAAAATCTATGTAAATATTTTAGAAAACAGAAAGCGGTAAATAATGTTTCACTTAATAT
CGAAAAGGGACAGATTTATGGACTGCTTGGACCGAATGGCGCTGGTAAATCTACCACATTGAAAATGCTGACCGGTATGA
TGAAACCAACTGCAGGAAAGATTTACTTTGATGGAAAACTTTTGGATAGGAAAGATTTATCAAAAATAGGAGCGTTAATT
GAAAATCCGCCTATTTATGAAAATCTTTCCGCCAGAGAGAATTTGAAGGTAAGACAATTATTGCTTGGTACAGATGAAAA
CAGAATTGATGAGGTCTTGCAGATTGTATCACTTACAAACACCGGAAAGAAGAAAGCAGGACAGTTTTCTTTGGGGATGA
AGCAAAGACTAGGCATTGCAATGGCATTGCTTGGAGAACCGGAACTTTTGATATTGGATGAACCTACGAATGGATTAGAT
CCAATAGGCATCGAGGAATTACGAGAGCTGATCCGGTCTTTTCCGGAACAGGGAATCACTGTAATTCTCTCCAGTCATAT
TCTCTCGGAGGTACAGTTACTTGCAGATAAAGTCGGGATTATTTCAGGTGGAATCTTAGGATACGAAGGAGCATTAAAGC
AGGGAGATAATCTTGAAGATTTGTTTATGAATGTGGTAAGAAAAAACCAGAAAGCAGGTGAAATCCATGGTTAA

Protein sequence :
MEMMLQTQNLCKYFRKQKAVNNVSLNIEKGQIYGLLGPNGAGKSTTLKMLTGMMKPTAGKIYFDGKLLDRKDLSKIGALI
ENPPIYENLSARENLKVRQLLLGTDENRIDEVLQIVSLTNTGKKKAGQFSLGMKQRLGIAMALLGEPELLILDEPTNGLD
PIGIEELRELIRSFPEQGITVILSSHILSEVQLLADKVGIISGGILGYEGALKQGDNLEDLFMNVVRKNQKAGEIHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 3e-48 53
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 5e-42 53
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 3e-43 49
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 3e-43 49
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 3e-43 49
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 3e-43 49
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 4e-41 47
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 4e-41 47
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 2e-40 45
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 1e-40 45
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 3e-32 45
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 3e-30 42
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 3e-30 42
DIP0755 NP_939128.1 lantibiotic ABC transporter ATP-binding protein Not tested Not named Protein 3e-30 42
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 8e-32 41