Gene Information

Name : EUBREC_3078 (EUBREC_3078)
Accession : YP_002938940.1
Strain : Eubacterium rectale ATCC 33656
Genome accession: NC_012781
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2943464 - 2944231 bp
Length : 768 bp
Strand : -
Note : CytoplasmicMembrane, score:9.49; COG1136 ABC-type antimicrobial peptide transport system, ATPase component; KEGG:0hypothetical protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439

DNA sequence :
ATGGCAATCTTAGAAGTAAGTAACCTCAAAAAAATATATACCACCAGATTTGGTGGCAACCAGGTACAGGCATTGAAAAA
CATCAATTTCTCTGTAGAGGAAGGTGAGTATGTGGCAATCATGGGAGAGTCCGGCTCAGGAAAGACGACACTTTTAAATA
TTCTCGCGGCACTTGATAAGCCGACAGCGGGAGAGGTACTCTTAAATGGAAAGAACCTTGTCTCATTGAAGGAAAAGGAG
ATATCTGCCTTCAGACGTGAGCATCTGGGCTTCGTATTTCAGGATTTTAATCTGCTTGACAATTTTTCACTGAAGGACAA
TATCTTTTTACCGCTTGTGCTGTCAGGTGTGGACTATAGGGATATGGAAAAAAGGCTTGCACCTATAGCTTCACTGCTTG
GAATTGAAAAGCTGCTTAATAAATATCCATACGAGGTGTCAGGAGGACAGAAGCAAAGGGCAGCAGTGGCACGTGCGATA
ATAACAAATCCCGAATTAATTTTGGCTGATGAGCCAACAGGAGCACTGGATTCAAAGGCAACAGACAGTCTGCTTAGGCT
GTTCAACAGGATAAACGAGGACGGACAGACCATTCTCATGGTGACACACAGCACAAAGGCTGCAAGTCATGCCAACAGGG
TGCTTTTCATAAAGGACGGTCAGGTGTTTCATCAGATTTACCGTGGTAATCTTACAAATGACGAGCTCTATGTGAAGATT
CAGGACGCACTTATGCTGATTACGACAGGTGGTGAGAAGCATGAATAA

Protein sequence :
MAILEVSNLKKIYTTRFGGNQVQALKNINFSVEEGEYVAIMGESGSGKTTLLNILAALDKPTAGEVLLNGKNLVSLKEKE
ISAFRREHLGFVFQDFNLLDNFSLKDNIFLPLVLSGVDYRDMEKRLAPIASLLGIEKLLNKYPYEVSGGQKQRAAVARAI
ITNPELILADEPTGALDSKATDSLLRLFNRINEDGQTILMVTHSTKAASHANRVLFIKDGQVFHQIYRGNLTNDELYVKI
QDALMLITTGGEKHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-36 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-36 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EUBREC_3078 YP_002938940.1 hypothetical protein NC_012469.1.7686878. Protein 6e-40 46
EUBREC_3078 YP_002938940.1 hypothetical protein CP001581.1.gene798.p Protein 8e-43 44
EUBREC_3078 YP_002938940.1 hypothetical protein CP001581.1.gene598.p Protein 4e-40 42
EUBREC_3078 YP_002938940.1 hypothetical protein NC_008702.1.4606598. Protein 3e-38 42