Gene Information

Name : EUBELI_20439 (EUBELI_20439)
Accession : YP_002935718.1
Strain :
Genome accession: NC_012780
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 404317 - 405195 bp
Length : 879 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGACAACAAATTCACAATATGAATTAAACAAAGGACTTGCACAGATGTTAAAGGGTGGCGTAATCATGGATGTTACTAC
TCCTGAGCAGGCTAAGATTGCAGAGGCCGCTGGTGCATGTGCTGTTATGGCACTTGAGAGAATCCCTGCCGATATCAGGG
CTGCAGGTGGTGTTTCGCGTATGAGCGACCCTAAGATGATTAAAGGTATTCAGGATGCTGTAAGTATTCCTGTTATGGCA
AAATGCCGTATTGGTCATTTCGTTGAAGCACAGATTTTACAGGCAGTTGAGATCGACTATATTGATGAATCTGAAGTATT
ATCTCCTGCTGATGATATATATCATATTGATAAAACCCAGTTCAAAGTACCTTTCGTATGTGGTGCAAGAGATTTAGGAG
AAGCATTAAGAAGAATCAATGAAGGTGCTTCCATGATAAGAACAAAAGGTGAACCTGGTACGGGGGATGTTGTTCAGGCT
GTACGACACATGAGAAAGATGAATTCTGAAATCAGAAAAATAACATCTATGCAAAAGGACGAGCTTTTCGAGGAAGCTAA
ACAGTTACAGGTTCCATATGACCTTGTCCTCTATGTACATGATAATGGAAAGCTTCCTGTAGTAAACTTTGCTGCCGGAG
GTGTTGCTACTCCTGCAGATGCTGCTCTTATGATGCAGTTAGGTGCTGAAGGTGTATTTGTAGGTTCTGGTATATTCAAG
TCTGGAAATCCTGCTAAGAGAGCTTCTGCCATAGTTCAGGCTGTCACTAACTACACAGATGCTGCACTTATTGCTAAATT
ATCAGAAGATTTGGGCGAAGCCATGGTTGGTATTAATCCTAGCGAAATACAGATAATCATGGAAGAAAGAGGCAGATAA

Protein sequence :
MTTNSQYELNKGLAQMLKGGVIMDVTTPEQAKIAEAAGACAVMALERIPADIRAAGGVSRMSDPKMIKGIQDAVSIPVMA
KCRIGHFVEAQILQAVEIDYIDESEVLSPADDIYHIDKTQFKVPFVCGARDLGEALRRINEGASMIRTKGEPGTGDVVQA
VRHMRKMNSEIRKITSMQKDELFEEAKQLQVPYDLVLYVHDNGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFK
SGNPAKRASAIVQAVTNYTDAALIAKLSEDLGEAMVGINPSEIQIIMEERGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 5e-86 69
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-86 69
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 7e-86 69