Gene Information

Name : EUBELI_20165 (EUBELI_20165)
Accession : YP_002935445.1
Strain :
Genome accession: NC_012780
Putative virulence/resistance : Resistance
Product : two-component system, OmpR family, KDP operon response regulator KdpE
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 130199 - 130897 bp
Length : 699 bp
Strand : -
Note : Psort-B: Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfam

DNA sequence :
ATGAATAAAACACAGATTCTTGTAGTTGAGGATGATTCACCAATAAGAAATCTCATAACAACAACATTAAAAACTAATAA
TTACAGGTATTTAACTGCTGTGAATGGAGAGAGTGCTATTTCACAGACTGCATCACATAATCCTGATATAATTCTGCTAG
ACTTAGGACTTCCTGATATAGATGGGGTGGAAGTTATAAAAAAGATAAGAACATGGACTAATACACCAATAATTGTTATA
AGCGCAAGAACTGAAGATGCGGATAAGATAGAAGCACTTGATGCAGGGGCAGACGATTATCTTACAAAGCCGTTTTCAGT
AGATGAGCTTCTTGCAAGGCTGCGTGTAACAGTAAGAAGACTGTCACTTATGCAGACGGATATGACTCAGAATACAAGTG
TATTCGAGAATGGAGATTTAAAAATTGACTATGCAGCTGGCTGTGCATATCTGAATGGAGAGGAGCTGCATCTTACACCT
ATTGAATATAAGCTTCTCATATTATTATCAAGAAATGTCGGAAGAGTGCTGACATACACTTATATTACTAAGAATATATG
GGGCAGTTCATGGGAAAATGATCTGGCATCACTTAGAGTATTTATGGCAACATTAAGAAAGAAAATTGAAAAAGATGTCA
ATTCCCCGCAGTATATACAGACGCATATTGGTATAGGATACAGAATGCTGAGAGTATAA

Protein sequence :
MNKTQILVVEDDSPIRNLITTTLKTNNYRYLTAVNGESAISQTASHNPDIILLDLGLPDIDGVEVIKKIRTWTNTPIIVI
SARTEDADKIEALDAGADDYLTKPFSVDELLARLRVTVRRLSLMQTDMTQNTSVFENGDLKIDYAAGCAYLNGEELHLTP
IEYKLLILLSRNVGRVLTYTYITKNIWGSSWENDLASLRVFMATLRKKIEKDVNSPQYIQTHIGIGYRMLRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 1e-29 48
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 4e-29 47
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 4e-29 47
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 4e-29 47
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 4e-29 47
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 3e-29 47
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 7e-32 44
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 5e-32 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EUBELI_20165 YP_002935445.1 two-component system, OmpR family, KDP operon response regulator KdpE NC_012469.1.7685629. Protein 3e-21 41