Gene Information

Name : NT01EI_1007 (NT01EI_1007)
Accession : YP_002932454.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : Dihydrodipicolinate synthetase family protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0329
EC number : -
Position : 994783 - 995673 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAGCTAACCGGTTTGATCGCTGCACCGCATACCCCGTTTAAAGCTGACGGCAGCGTTAACTACCCGGTCATCGA
CCGGATTGCCGAACACCTGATCGCTGATGGCGTCACCGGCGCCTATGTTTTGGGCACCACCGGCGAGGGGATTCAGTGTT
CGGTGGAAGAGCGTATGCGCATCGCCGAACGCTGGGTCGACGCCAGTCAGGGCAAGCTGGATCTGATCGTGCATACCGGG
GCGCTGAGCATTGCCGACGCCGTGACGCTGGCGCGTCATGCCAACACCCTGGATATCATGGCGACCTCCGTGATCGGCCC
CTGCTTCTTTAAACCGGCCAGCGTGGATGACCTGGTCGAATACTGTCGTCTGGTGGCCGGGGCCGCGCCGGATAAAGGTT
TTTATTACTATCACTCCAGCATGTCCGGCCTGAGCATCGACATGGAGCGCTTCCTGCAAAGTGCCTCCGGGCGCATTCCC
AACCTGAGCGGCATGAAGTTCAATGCCAGCGATATGTATGAGTACCAGCGCTGCCTGCGGGTAGAGAACGGCCGCTTCGA
TATTCCGTTCGGCGTCGATGAGTTTATGCCCGCCGGGCTTGCCTGCGGCGCCACCAGCGCCGTCGGCAGCACCTACAACT
ACGCCGCACCGCTCTACTTGCGCCTGATCGAGAGCTTCCGCCGCGGCGATATGCAGGATGTCGCCCAGTGCATGGATAAA
GTGATCGCCATCATCCGGGTGCTGGTCGAATACGGCGGCGTCGCCGCGGGCAAGGTCGCCATGCAGCTGCACGGCATCGA
CGTCGGCGATCCGCGCCGTCCGCTGCGCCCGATGACGACCCAGCAAAAGGCCGACGCGCTGGCCAAATTCCGCGCCGCCG
AGTTCCTGTAA

Protein sequence : 
MKKLTGLIAAPHTPFKADGSVNYPVIDRIAEHLIADGVTGAYVLGTTGEGIQCSVEERMRIAERWVDASQGKLDLIVHTG
ALSIADAVTLARHANTLDIMATSVIGPCFFKPASVDDLVEYCRLVAGAAPDKGFYYYHSSMSGLSIDMERFLQSASGRIP
NLSGMKFNASDMYEYQRCLRVENGRFDIPFGVDEFMPAGLACGATSAVGSTYNYAAPLYLRLIESFRRGDMQDVAQCMDK
VIAIIRVLVEYGGVAAGKVAMQLHGIDVGDPRRPLRPMTTQQKADALAKFRAAEFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1776 NP_231411.1 N-acetylneuraminate lyase Not tested VPI-2 Protein 3e-104 73
VC0395_A1374 YP_001217317.1 dihydrodipicolinate synthetase family protein Not tested VPI-2 Protein 3e-104 73
VPI2_0024c ACA01841.1 dihydrodipicolinate synthase/N-acetylneuraminate lyase Not tested VPI-2 Protein 6e-104 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_1007 YP_002932454.1 Dihydrodipicolinate synthetase family protein VFG1109 Protein 1e-104 73