Gene Information

Name : NT01EI_0965 (NT01EI_0965)
Accession : YP_002932414.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : response regulator receiver domain protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 955101 - 955745 bp
Length : 645 bp
Strand : -
Note : -

DNA sequence : 
ATGACTATCTCTATTTTGCCGCTGAGCATTCTGATCGTTGAAGACCATGCCTTGCTGGCCGATGGCATCCGTAATCTCCT
GGACAGTCAGCCCCGCTACCGGGTCGTGGGCGCCGTATCGAATGGACTGGCCGTTTATGAGGCCTGCCAGCGCCTCTCGC
CCGATCTGGTCTTGCTCGATCTGGGTCTGCCGGGCATGGACGGCGTTGATGTAATCCGTCAGCTGCGGCGCCGCTGGAAC
GATATGCGTATCGTCGTCGTCACCGCCTCGTCTGAGGCGCGGCGCGGCAGCGACGCCCTCGCCGCCGGCGCGCTCGCCTA
TGTTCTGAAGCAAAGCCCACAGCAAACCCTGCTGGCAGCAATGCAGCATGCATCACTGGGAAAAACCTTTGTCGATCCCG
CCCTCAGGCTGGACTCCCTGGAGGCCTCTTCCGATATAGCTCAGGAACCGCCCCTGACCCTGCGCGAACGGCAAATACTC
AAGCTGGTCGCCGAGGGTAATCGCAACCGGGATATCGCTGAGCTGCTGTCCATCAGCCTGAAAACCGTGGAGACCCATCG
GCTCAACCTGATGCGCAAGCTGGATGCCCACAACGCGGCGGAGCTGAGCAATTGGGCCCGCCGACTGGGTGTGCTGGAGG
TTTAA

Protein sequence : 
MTISILPLSILIVEDHALLADGIRNLLDSQPRYRVVGAVSNGLAVYEACQRLSPDLVLLDLGLPGMDGVDVIRQLRRRWN
DMRIVVVTASSEARRGSDALAAGALAYVLKQSPQQTLLAAMQHASLGKTFVDPALRLDSLEASSDIAQEPPLTLRERQIL
KLVAEGNRNRDIAELLSISLKTVETHRLNLMRKLDAHNAAELSNWARRLGVLEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0255 YP_002345335.1 two-component response regulator Not tested Not named Protein 6e-40 56
ssrB CAB09344.1 SsrB Virulence SPI-2 Protein 1e-31 50
ssrB NP_805062.1 two-component response regulator Virulence SPI-2 Protein 7e-35 49
ssrB NP_460356.1 transcriptional activator Virulence SPI-2 Protein 7e-35 49
ssrB YP_216399.1 secretion system transcriptonal activator Virulence SPI-2 Protein 1e-34 49
ssrB NP_456137.1 putative two-component response regulator Virulence SPI-2 Protein 7e-35 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_0965 YP_002932414.1 response regulator receiver domain protein VFG0492 Protein 2e-35 49