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Name : NT01EI_0943 (NT01EI_0943) Accession : YP_002932391.1 Strain : Edwardsiella ictaluri 93-146 Genome accession: NC_012779 Putative virulence/resistance : Virulence Product : type III secretion outer membrane pore, YscC/HrcC family, putative Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 935546 - 937030 bp Length : 1485 bp Strand : - Note : - DNA sequence : ATGAGAATCATCGTTCTACTGATCTTACTCTGCTGTGAATTTTCCGCCGTCAGCCTGGCTCAGCCTATCCCCTGGCGAGG TGCCCCCTTTTTCGTCTCCAGTCAGAGCGTCACACTGGCCTCAGTGCTGCGCGATCTTGGCGCCAACTCCGGCGTGCCGG TGGTGGTTAGCCCCCACATTACCGAGTCCTACGTGGGAGAGCTTCGTGATTCACCACCCGGCACGATACTGGCCGAGCTA AGCCGACTGTACCAACTGCTGCCCTACTACGATGGCAATACGCTGTATGTCTATAAGGCCCAGGAGGTGGAACAGACCAC GCTGGCGCCCAGTTACCTGGCGGGATCGGTACTCAAACGCCTATTGCAGCGCAGCGGGTTGCTGGACGGCTATGCCTGCC AGGTCCGCCAGGTTGCGGCCGCCAATGCCCTACAGGTTAACGGCGTCCCCGCCTGCCTAAGCCAGGTGACGACTCTGGCC AAACAGCTGGACGAGCAGGATCTTAACCAGGAACAAAACCGTGAAACCGTCGAAGTCTTCCCGCTCAAGTATGCCAACGC CAGCGACACCAGCTACACCTACCGCAACCAGAGCGTCGTCGTCCCAGGACTGGTATCGGTACTGCGCGAGATGGCACAGG GGCACGCCATGCCGCTTCCTGACAGTAAAAGCAGCACGCCTCCCAGCAACAGTAGCGGCCTGCCCACCTTCTCGGCTGAC CTGCGCCAAAACGCGGTATTAATCCGCGATCGCAAACAGAATATGGCGCTCTACCGCCAGCTGATCCAACGGCTGGACAA ACGCCCGACCCTGATTGAAATCTCCGTGACCATCATCGACGTGGATGCCGGGGATATCAACCAACTGGGCATTGACTGGT CCGCCTCTGCGCGCATCGGCGGCGGCCAGGTCAGCTTCAACAACGGCGGCAGACTCAACAGCGACAGTTTCTCTTCACTG ATCTCCAACTCCGGCAGCTTTATGGTGCGCCTCTCCGCCCTGGAGCAGCAGTCTAAGGCCAAGATCGTGTCACGCCCCTC CGTCGTCACGCTGGACAATGTGCAGGCGGTGCTGGATCGCAGTATCACGTTCTATACCAAGCTCAGCAGCGAGAAAAACC CCAAGCTGGAGGCGATTACCTCGGGGGCCCTGATGCGTGTTACGCCGCGCCTTATCCGGGAAAACGGCGGGAATAAGGTA TTACTGATCCTCAATATCGAGGACGGACGTCAAGGTGCACCGCTCAGCCAGACGGAGTCCCTGCCTCAGGTACAAAACGC AGAAATCGCCACCCAGGCGACCCTGAATCTGGGACAGGCCCTGCTGCTGGGTGGCTTTGTGCAGAATGAAAATACGCAGG GCGTTCGCAAGATTCCGTTGCTGGGTGACCTTCCCCTGATCGGCGGACTGTTCCGCAGCACCGATCGCAATACACTCAGC GTTGTACGCCTATTCCTGATTAAAGCCGAGCCCCGCCAGATGTGA Protein sequence : MRIIVLLILLCCEFSAVSLAQPIPWRGAPFFVSSQSVTLASVLRDLGANSGVPVVVSPHITESYVGELRDSPPGTILAEL SRLYQLLPYYDGNTLYVYKAQEVEQTTLAPSYLAGSVLKRLLQRSGLLDGYACQVRQVAAANALQVNGVPACLSQVTTLA KQLDEQDLNQEQNRETVEVFPLKYANASDTSYTYRNQSVVVPGLVSVLREMAQGHAMPLPDSKSSTPPSNSSGLPTFSAD LRQNAVLIRDRKQNMALYRQLIQRLDKRPTLIEISVTIIDVDAGDINQLGIDWSASARIGGGQVSFNNGGRLNSDSFSSL ISNSGSFMVRLSALEQQSKAKIVSRPSVVTLDNVQAVLDRSITFYTKLSSEKNPKLEAITSGALMRVTPRLIRENGGNKV LLILNIEDGRQGAPLSQTESLPQVQNAEIATQATLNLGQALLLGGFVQNENTQGVRKIPLLGDLPLIGGLFRSTDRNTLS VVRLFLIKAEPRQM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0257 | YP_002345337.1 | type III secretion protein | Virulence | Not named | Protein | 1e-118 | 54 |
| spiA | NP_456134.1 | putative outer membrane secretory protein | Virulence | SPI-2 | Protein | 8e-93 | 48 |
| spiA | NP_805065.1 | outer membrane secretory protein | Virulence | SPI-2 | Protein | 8e-93 | 48 |
| ssaC | YP_216402.1 | secretion system apparatus protein SsaC | Virulence | SPI-2 | Protein | 8e-93 | 48 |
| spiA | AAC44301.1 | SpiA | Virulence | SPI-2 | Protein | 4e-93 | 48 |
| ssaC | NP_460359.1 | outer membrane secretin precursor | Virulence | SPI-2 | Protein | 5e-93 | 48 |
| unnamed | AAL06362.1 | EscC | Virulence | LEE | Protein | 5e-93 | 42 |
| escC | CAC81855.1 | EscC protein | Virulence | LEE II | Protein | 2e-95 | 42 |
| escC | CAI43881.1 | EscC protein | Virulence | LEE | Protein | 2e-95 | 42 |
| escC | YP_003236095.1 | T3SS structure protein EscC | Virulence | LEE | Protein | 9e-95 | 42 |
| escC | AAK26708.1 | EscC | Virulence | LEE | Protein | 2e-95 | 42 |
| escC | YP_003223482.1 | T3SS structure protein EscC | Virulence | LEE | Protein | 3e-95 | 42 |
| escC | YP_003232146.1 | T3SS structure protein EscC | Virulence | LEE | Protein | 3e-95 | 42 |
| escC | AAL57535.1 | EscC | Virulence | LEE | Protein | 2e-95 | 42 |
| escC | NP_290275.1 | hypothetical protein | Virulence | LEE | Protein | 3e-95 | 42 |
| ECs4575 | NP_312602.1 | EscC | Virulence | LEE | Protein | 3e-95 | 42 |
| escC | AAC31520.1 | L0041 | Virulence | LEE | Protein | 2e-95 | 42 |
| escC | ACU09465.1 | type III secretion outer membrane pore YscC/HrcC family | Virulence | LEE | Protein | 2e-95 | 42 |
| escC | AFO66299.1 | putative type III complex subunit | Virulence | SESS LEE | Protein | 6e-97 | 42 |
| escC | AFO66408.1 | putative type III complex subunit | Virulence | SESS LEE | Protein | 6e-97 | 42 |
| escC | AAC38377.1 | EscC | Virulence | LEE | Protein | 2e-94 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NT01EI_0943 | YP_002932391.1 | type III secretion outer membrane pore, YscC/HrcC family, putative | VFG0495 | Protein | 2e-93 | 48 |
| NT01EI_0943 | YP_002932391.1 | type III secretion outer membrane pore, YscC/HrcC family, putative | VFG0819 | Protein | 1e-95 | 42 |
| NT01EI_0943 | YP_002932391.1 | type III secretion outer membrane pore, YscC/HrcC family, putative | VFG0723 | Protein | 1e-94 | 41 |
