Gene Information

Name : NT01EI_0939 (NT01EI_0939)
Accession : YP_002932387.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : type III secretion apparatus needle protein, putative
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 933080 - 933301 bp
Length : 222 bp
Strand : -
Note : -

DNA sequence : 
ATGAACATTGAGGATATTGTCTCTCAGCTGGACAATCAGGTTTCCCGTATATCCAGCGATGCAAACTCCGTCATCACCTC
TGGCAACGTCAACAACAATCCAGAGGCCATGCTGAAAGCCCAGTTTGCCATGCAGCAGTACTCCGTGATGATCGGCTATC
AAAGCTCGATCATGAAAACCGTCAAAGACATGATGATGAGCATCATCAGTAAAATAGGATAA

Protein sequence : 
MNIEDIVSQLDNQVSRISSDANSVITSGNVNNNPEAMLKAQFAMQQYSVMIGYQSSIMKTVKDMMMSIISKIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaG CAA12193.1 SsaG Virulence SPI-2 Protein 2e-09 42
ssaG NP_456122.1 putative pathogenicity island protein Virulence SPI-2 Protein 3e-09 42
ssaG NP_805077.1 pathogenicity island protein Virulence SPI-2 Protein 3e-09 42
ssaG NP_460371.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-09 42
ssaH AAC28874.1 SsaH Virulence SPI-2 Protein 2e-09 42
ssaG YP_216414.1 secretion system apparatus protein SsaG Virulence SPI-2 Protein 3e-09 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_0939 YP_002932387.1 type III secretion apparatus needle protein, putative VFG0507 Protein 7e-10 42