|
Name : NT01EI_0857 (NT01EI_0857) Accession : YP_002932307.1 Strain : Edwardsiella ictaluri 93-146 Genome accession: NC_012779 Putative virulence/resistance : Unknown Product : transcriptional regulator, Cad family Function : - COG functional category : K : Transcription COG ID : COG3710 EC number : - Position : 857099 - 858745 bp Length : 1647 bp Strand : + Note : - DNA sequence : ATGCAAGAGCAAACTTTCCGCGTAGGCGAGTGGTTAGTACTGGCAGCAGACAATAAAATCACCCGCGAAGGACGCGTGTT GGTACTTGAGCCCAGACTCATCGACATGTTGAGCTATTTTGCTCATCATCCTGATATGGTGTTGAGCAGAGATGAGCTGA TTGATAATGTATGGAAACGGAATATCGTTACCAATCATGTTGTTACTCAGTGTATCTCCGAGTTGCGCAAGTACTTGAAG GATGGTCGTCCCGAAGCGCCAGAGTATATCGTGACCGTGCCGAAGCGTGGTTATAAGCTGGTTGAGTCGGTCATTTGGTG TGGAGAGGAGAGTCTCGAACAGCTGGTTGCGGCGGTTTTACCGGCAGAGACGCCGTCGTTCCCCGCTGCTGCCGAAGCAG TCACGCCGTCAGGGTCAGCCAGCCCTGCGTTCGCCGCGGAATCTGGTGCTGTTACGCCGCCCCCCGCATCTACGCCGCTC CTTATGGCGCAACCTGCGTCGTCGTGTGATACACCGGTGATGCCTCCAACGTCTGCGCTTACTGCCGACGCCGCGCCGAC GCCGCGGCGCCTGCGCTCCTCATCCTGGGTCTGGGTGGCTTTTTGGGTGACGCTGGCGCTGTGCGCGGCCTTTGTCGGGC TGGCGGTGTTCAGTCACCGGGGACCGGTGGTGTCCCATCCGATGCTGCTCAATCCACGCGATATTGATATCCGTATTCAG GGCGGTAACCGCTGCAGTAACTGGACCAATCAACTCTCCTATGTCATCGGGCTAAGTGAGGATCTGGCCCAGGGGCTGAA TACCTACTCTACCTTCCTGGTCCACGATCAGACCAACTATAACTATGGTGGCAAAAGCAGCTCCGGCAAGTCGCTGTACA TCGAGTTTGTCAATCAGCGCCACTATCGGGCGCAGCAGTGTTTCCTCTCTGTTCGCCTGGTAGACAATGCGGATAATTTG GTCATGCTGGAGAAGCGTTATTTTATCACACCGGATAACCTGCTCAGCGTACAGAAGGACTTCATTAATAGCATCTTTAC CGTGCTCAAGGTCAGTATGCCTCCTTCGCTGGATAAGCGTTATGAGACGCTGATGCCTACGCACAGCCAGGTGTTGCAGC AGTATTACCATGCCCATCAGTTGCTGTTGCAGGGCGACAGCGAATCACTCAATCAAGCCAGCCAGCTGTTGACGCAGATT ATTCAGCAGGACCCCGACTTTGTGTATGCCAAGGCGGAAAAGGCGCTGGTCGATATTCTGCTTAACTCCTATCAGCCCCT CAGTGCTCCGCAGCTGACAGCACTGCGCCAAGAGATCAATGACGTAGAGCATAACCCGCTGCTGCAGGGGACACCGATCA TTCAGCAAATTTATACTGTCGACTATCTGGGGCAGGGGAAGGTGGCTCAGGCCTGCTCCGCTATCAATAAGGGCATTGAT CTGGAAATGTCCTGGTTAAACTATGTGTTGCTGGGTAAGGTTTATGAGCTAAAGGGTCAGAATAACCAGGCGGCCGATGC CTATATCACCGCCTTTAATTTGCGACCGGGTCATAATACGCTGGACTGGATTAAAAATGGTGTATTCCAAACTAATATTG AGCGCGTCGCACCTTACCTACTCAATTACAATGTAAATAAATTTTGA Protein sequence : MQEQTFRVGEWLVLAADNKITREGRVLVLEPRLIDMLSYFAHHPDMVLSRDELIDNVWKRNIVTNHVVTQCISELRKYLK DGRPEAPEYIVTVPKRGYKLVESVIWCGEESLEQLVAAVLPAETPSFPAAAEAVTPSGSASPAFAAESGAVTPPPASTPL LMAQPASSCDTPVMPPTSALTADAAPTPRRLRSSSWVWVAFWVTLALCAAFVGLAVFSHRGPVVSHPMLLNPRDIDIRIQ GGNRCSNWTNQLSYVIGLSEDLAQGLNTYSTFLVHDQTNYNYGGKSSSGKSLYIEFVNQRHYRAQQCFLSVRLVDNADNL VMLEKRYFITPDNLLSVQKDFINSIFTVLKVSMPPSLDKRYETLMPTHSQVLQQYYHAHQLLLQGDSESLNQASQLLTQI IQQDPDFVYAKAEKALVDILLNSYQPLSAPQLTALRQEINDVEHNPLLQGTPIIQQIYTVDYLGQGKVAQACSAINKGID LEMSWLNYVLLGKVYELKGQNNQAADAYITAFNLRPGHNTLDWIKNGVFQTNIERVAPYLLNYNVNKF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadC | NP_756990.1 | DNA-binding transcriptional activator CadC | Not tested | PAI II CFT073 | Protein | 2e-109 | 49 |
| cadC | AAL67383.1 | transcriptional activator | Not tested | PAI II CFT073 | Protein | 2e-109 | 49 |
