Gene Information

Name : NT01EI_0713 (NT01EI_0713)
Accession : YP_002932169.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : ABC transporter, ATP-binding domain protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 705425 - 706198 bp
Length : 774 bp
Strand : +
Note : -

DNA sequence : 
ATGTTTTCGCTAACCAACCTAGAGGTTGTGCGCGGGGGACGCGAGGTCCTGGTTATCGAACAGTTGACGATCCCAACGGA
TCGTCTGACGGTAATTCTGGGACATAACGGGTCCGGTAAATCGACGCTGGTCAGCCTGCTGGCCGGCCAGCTGCGCCCCG
ACGGCGGCCAGATCGCTCTGGATGGGCAGGCGCTGTCATCCCTCTCCGCCGGTGCACTGGCGCGGCGGGTGGCCTTTTTA
CCGCAGAAGCTGCCCACCAGCGCCGGGCTGACCGTGAGGGAGCTGGTGCGCCTGGGGCGTTTTCCATGGCGTGGCATGCT
GGGGCGCTGGCGCCGTGAAGATCGGCAGCTCATCGACGCGGCGATGGCTGAGACCGGGGTGACCCCCTTTGCCGAAACGC
TGGTGGATACGCTGTCCGGCGGGGAACGCCAGCGGGCGTGGGTCGCCATGCTGCTGGCGCAGGCCTCGCCGCTACTGATC
CTTGATGAACCGACCTCGGCGCTGGATATCCAGCATCAGTACCAACTCATGGCGCTGCTATCGGCGCTGCCGCGCGGTGT
CTTGGTCATTCTGCACGACCTGAATCTGGCGCTGCGCTATGCCGATCACGTGATTGCCCTGAAGCAGGGGCGCGTGGCCT
TCGCTGGCCCGGCGGCGGCGTTGGCCGACGAGCGGCGCCTGTCCGAGCTGTACCAAACCCCGATCCGCCTGACGGATCAC
CCGCATCCTGCCCCCGGGGCGCCGCCTCATAAAGTTGCTATCGTATGTGCTTGA

Protein sequence : 
MFSLTNLEVVRGGREVLVIEQLTIPTDRLTVILGHNGSGKSTLVSLLAGQLRPDGGQIALDGQALSSLSAGALARRVAFL
PQKLPTSAGLTVRELVRLGRFPWRGMLGRWRREDRQLIDAAMAETGVTPFAETLVDTLSGGERQRAWVAMLLAQASPLLI
LDEPTSALDIQHQYQLMALLSALPRGVLVILHDLNLALRYADHVIALKQGRVAFAGPAAALADERRLSELYQTPIRLTDH
PHPAPGAPPHKVAIVCA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-36 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-36 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-36 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-36 44
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-29 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_0713 YP_002932169.1 ABC transporter, ATP-binding domain protein BAC0164 Protein 1e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_0713 YP_002932169.1 ABC transporter, ATP-binding domain protein VFG0925 Protein 2e-36 44
NT01EI_0713 YP_002932169.1 ABC transporter, ATP-binding domain protein VFG1042 Protein 1e-29 42