Gene Information

Name : NT01EI_0598 (NT01EI_0598)
Accession : YP_002932062.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : ROK family protein
Function : -
COG functional category : K : Transcription
COG ID : COG1940
EC number : -
Position : 582028 - 582903 bp
Length : 876 bp
Strand : -
Note : -

DNA sequence : 
ATGAATACGCTGGCCATTGATCTGGGCGGAACCAAGCTGGCGGCAGCGTTGGTCGATGCCAACGGCCAGCTGAGCCAACG
CAGCGAGGTCGCCACGCCGGTCAGCGGTGACCCGGAGGCCCTAACGAAGGCGCTCTCCCAGCTAGTCACCCGCTATCGAG
GAATGGCAGGCAGGGTTGCCGTCGCCTCTACCGGCATTATTCACCAGGGGATCCTCAGCGCCCTGAATCCCGATAACCTG
GGCGGGCTGGACCGTTTTCCTCTGCAGGAGTGCATTGAGAGGCTCAGCGCGCTGCCCTGCTATCTTCTCAACGATGCCCA
GGCCGCGGCCTGGTCAGAGTACCTTACCCTGACCCCCAGCGGTCAGGATATGGCGTTCATTACGGTATCGACCGGCGTCG
GCGGCGGACTGGTGCTCAACGGTCGCCTTCAGATCGGACGCGGTGCCTTCGCTGGCCACATTGGCCATACCCTGGCCGAT
CCGGCGGGGCCACGCTGCGGCTGCGGGCGCAGCGGCTGCGTAGAGTCCATCGCCTCAGGGCGGGCTATCGCCGCGGCGGC
TCAGGGCGATCTGACCGGCCTCGATGCCCGCGCTATTTTTCAGCGGGCCGCCGCTGACGATGCCCAGGCACAGCGACTCA
TCGCCCGCTCTGCGCAGGCGATCGCCCAGCTGATCGCCGATCTGCGGGCCACGCTGGATATCCAGTGCGCGGTGATCGGT
GGCAGCGTCGGCCTGGCGCCAGACTATCTGGCTCAGGTTCAGTATTTTCTGCGGCAGCTGCCGCACGCTTACCACACCAC
GCTGTATCCAGCCCGCCATCAACGCGATGCCGGCCTGATCGGTGCGGCGCTCTGGAGTCGGAGAGAAACGATATGA

Protein sequence : 
MNTLAIDLGGTKLAAALVDANGQLSQRSEVATPVSGDPEALTKALSQLVTRYRGMAGRVAVASTGIIHQGILSALNPDNL
GGLDRFPLQECIERLSALPCYLLNDAQAAAWSEYLTLTPSGQDMAFITVSTGVGGGLVLNGRLQIGRGAFAGHIGHTLAD
PAGPRCGCGRSGCVESIASGRAIAAAAQGDLTGLDARAIFQRAAADDAQAQRLIARSAQAIAQLIADLRATLDIQCAVIG
GSVGLAPDYLAQVQYFLRQLPHAYHTTLYPARHQRDAGLIGAALWSRRETI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nanK YP_002414055.1 N-acetylmannosamine kinase Not tested Not named Protein 6e-41 49
VC1782 NP_231417.1 N-acetylmannosamine kinase Not tested VPI-2 Protein 4e-33 42
VC0395_A1379 YP_001217322.1 N-acetylmannosamine kinase Not tested VPI-2 Protein 4e-33 42
VPI2_0030 ACA01847.1 ROK family protein Not tested VPI-2 Protein 5e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_0598 YP_002932062.1 ROK family protein VFG1115 Protein 2e-33 42