Gene Information

Name : NT01EI_0515 (NT01EI_0515)
Accession : YP_002931984.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : transcriptional regulator QseB, putative
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 509132 - 509791 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCGTACTGTTAATTGAAGATGATCGCCTGATCGGCGACGGTATTAAAGCCGGATTAAGTAAAATGGGATTCACCGT
GGACTGGTTTACCGACGGTCAGCAGGGCATGACAGCACTGGATAGCGCGCCCTATGACGCCGTGATCCTCGATCTGAGCT
TGCCGGGCATCGACGGACTGGAGATCCTGCGCTGCTGGCGCGAGGCCGGACACGCGGAGCCGGTTCTGATCCTGACCGCC
CGCGATGCCCTGGAGCAGCGGGTGATCGGGCTACAGCAGGGCGCAGACGACTATCTGTGTAAACCCTTCGCCCTGATCGA
GGTCGCTGCACGCCTGCAGGCCCTTATCCGCCGCAACCACGGCCAGGCCCAGACGCTACTCAGCCACGGTGCGGTGAGTC
TCGATCCCCTTAGCCTCACCGCAACCCTTGACGGTGCATCGCTGCCGCTAAAGCCCAAAGAGTTCGCCCTGCTGGAGCTA
CTGCTGCGTAACGCCGGGCGCGTGCTGCCGCGCTCACTGATCGAGGAAAAACTCTACAGCTGGGATGATGAGGTCTCCAG
CAACGCCGTCGAGGTCCACATCCACCACCTGCGCCGCAAGCTGGGCAGCCACTTTATCCGCACCGTGCACGGCGTTGGCT
ACACGCTGGGAGACGCCTGA

Protein sequence : 
MRVLLIEDDRLIGDGIKAGLSKMGFTVDWFTDGQQGMTALDSAPYDAVILDLSLPGIDGLEILRCWREAGHAEPVLILTA
RDALEQRVIGLQQGADDYLCKPFALIEVAARLQALIRRNHGQAQTLLSHGAVSLDPLSLTATLDGASLPLKPKEFALLEL
LLRNAGRVLPRSLIEEKLYSWDDEVSSNAVEVHIHHLRRKLGSHFIRTVHGVGYTLGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-42 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_0515 YP_002931984.1 transcriptional regulator QseB, putative BAC0487 Protein 7e-41 46
NT01EI_0515 YP_002931984.1 transcriptional regulator QseB, putative BAC0083 Protein 2e-35 44
NT01EI_0515 YP_002931984.1 transcriptional regulator QseB, putative BAC0638 Protein 2e-29 43
NT01EI_0515 YP_002931984.1 transcriptional regulator QseB, putative BAC0347 Protein 5e-33 41
NT01EI_0515 YP_002931984.1 transcriptional regulator QseB, putative BAC0197 Protein 1e-35 41
NT01EI_0515 YP_002931984.1 transcriptional regulator QseB, putative BAC0308 Protein 3e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_0515 YP_002931984.1 transcriptional regulator QseB, putative VFG0473 Protein 3e-39 44
NT01EI_0515 YP_002931984.1 transcriptional regulator QseB, putative VFG1390 Protein 2e-33 41