Gene Information

Name : NT01EI_0454 (NT01EI_0454)
Accession : YP_002931927.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : two-component transcriptional regulator protein, putative
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 454276 - 454938 bp
Length : 663 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGATCCTGATCGTGGAAGACGATACCCTGATCCAGCAGGGGCTGGCCCAGGCGATGGCGCGGGAAAACTATGCCTA
TGACTGTGCGGACAGCGCAGTAGGCGCCAGTGCACTGCTGCAGAGCAGCCACTACAGCCTGATCATCCTCGATCTGGGGC
TGCCCGACATAGACGGCGCCAACGCGCTGCGTCAGTGGCGGCGCGAAGGTATCGACGCGCCGGTGCTAATCCTCACCGCC
CGCGACACCGTCAGCGATCGTGTCGATGGGCTGGATGCCGGTGCCGATGACTATCTGGTTAAGCCTTTTGCACTGGCCGA
GCTGCTGGCGCGCGTCCGCGCCCTGATCCGCCGTATGCAGGGGCTGTGCAACAACTTTCTGCAGGTCGATGATATTCATC
TGGATCTCTCCAGCCAGCAGGTCACCTGCGGCGGCCAGGCGCTGGAGATCACCCCAAAAGAGTTCGCCATCCTGGCACGC
TTGATGATGCGCGCAGGGCAGACTATCAACCGTGAAGTCCTACAGCAGGATCTCTACTCCTGGCAGGATGGACTCAGCTC
CAACTCGCTGGAGGTACATATCCATAACCTACGGCGCAAACTGGGGAAAAAACGCATAAAAACCCTGCGCGGCGTCGGCT
ATCGGCTGGAGAAGACGCAGTGA

Protein sequence : 
MKILIVEDDTLIQQGLAQAMARENYAYDCADSAVGASALLQSSHYSLIILDLGLPDIDGANALRQWRREGIDAPVLILTA
RDTVSDRVDGLDAGADDYLVKPFALAELLARVRALIRRMQGLCNNFLQVDDIHLDLSSQQVTCGGQALEITPKEFAILAR
LMMRAGQTINREVLQQDLYSWQDGLSSNSLEVHIHNLRRKLGKKRIKTLRGVGYRLEKTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 9e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_0454 YP_002931927.1 two-component transcriptional regulator protein, putative BAC0487 Protein 8e-45 63
NT01EI_0454 YP_002931927.1 two-component transcriptional regulator protein, putative BAC0083 Protein 1e-19 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_0454 YP_002931927.1 two-component transcriptional regulator protein, putative VFG0473 Protein 1e-38 55