Gene Information

Name : NT01EI_3734 (NT01EI_3734)
Accession : YP_002935096.2
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : response regulator receiver domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3620784 - 3621497 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence : 
ATGACGGTGAAACGAATTCTGGTGGTAGAGGATGACACGCTGATTGCCGAACTGCTGACGCTGCATCTGTGCGATGAGGG
ATACCGGGTGACCCACGCTGCCGACGGCGATCGGGGGATGGCGCTGGTTGAACAGGGTGGATGGGACGCGCTGATCCTCG
ATCTGATGCTACCGGGCGTGGATGGGCTGGATATCTGCCGCCGGGTGCGCACCATGACCCGCTATACCCCGATCATCATC
ACCAGCGCCCGATCCAGCGAAGTTCACCGGGTGCTGGGGCTGGAACTGGGAGCCGACGATTACCTGGCCAAGCCGTTTTC
CATGATTGAGCTGGTCGCCCGGGTAAAGGCGCTGTTTCGTCGCCAGGAGGCAATGGGCCGCAACCTGATGCTGGAGGGGG
GACGCCTGAGCTATGGCCTGCTGACCATCGACCCCATGGCGCGGGCGGTGTGGGTGGGGGAGCGGCCGATTGAGCTCACG
CCGCGCGAATTCGATCTGCTGTACTTCTTTGCCCGTCACCCCGGGCAGGTATTTTCACGTCTGCAGCTATTGGACAAGGT
GTGGGGATACCAACACGACGGCTACGAGCATACGGTCAATACCCATATTAACCGCCTGCGTACCAAGATCGAGGCCGATC
CCGCCGAGCCGGCGCTGATCCTGACCGTCTGGGGCGCCGGCTACAGGTTCGCCGACGCCGGGGGGGCGGTATGA

Protein sequence : 
MTVKRILVVEDDTLIAELLTLHLCDEGYRVTHAADGDRGMALVEQGGWDALILDLMLPGVDGLDICRRVRTMTRYTPIII
TSARSSEVHRVLGLELGADDYLAKPFSMIELVARVKALFRRQEAMGRNLMLEGGRLSYGLLTIDPMARAVWVGERPIELT
PREFDLLYFFARHPGQVFSRLQLLDKVWGYQHDGYEHTVNTHINRLRTKIEADPAEPALILTVWGAGYRFADAGGAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 8e-75 65
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-74 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein AE000516.2.gene3505. Protein 4e-37 46
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein AE016830.1.gene1681. Protein 7e-47 44
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_012469.1.7685629. Protein 9e-41 43
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein AF155139.2.orf0.gene Protein 1e-43 43
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_002952.2859905.p0 Protein 7e-41 43
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_009782.5559369.p0 Protein 1e-40 43
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_002951.3237708.p0 Protein 1e-40 43
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_002758.1121668.p0 Protein 1e-40 43
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_009641.5332272.p0 Protein 1e-40 43
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_013450.8614421.p0 Protein 1e-40 43
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_007793.3914279.p0 Protein 1e-40 43
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_003923.1003749.p0 Protein 8e-41 43
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_002745.1124361.p0 Protein 1e-40 43
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_007622.3794472.p0 Protein 6e-41 43
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein HE999704.1.gene1528. Protein 2e-34 42
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_010079.5776364.p0 Protein 1e-33 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_002952.2859858.p0 Protein 1e-33 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_007622.3794948.p0 Protein 1e-33 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein AE015929.1.gene1106. Protein 1e-29 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_003923.1003417.p0 Protein 1e-33 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_013450.8614146.p0 Protein 1e-33 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_002951.3238224.p0 Protein 1e-33 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_007793.3914065.p0 Protein 1e-33 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_002758.1121390.p0 Protein 1e-33 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_011595.7057856.p0 Protein 3e-32 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_010410.6002989.p0 Protein 3e-32 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_010400.5986590.p0 Protein 3e-32 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein BAC0111 Protein 3e-34 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein FJ349556.1.orf0.gene Protein 1e-38 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_012469.1.7686381. Protein 2e-45 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein BAC0125 Protein 6e-33 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein HE999704.1.gene2815. Protein 4e-40 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein CP000034.1.gene2186. Protein 2e-33 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein NC_002695.1.916589.p Protein 2e-33 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein CP001138.1.gene2239. Protein 6e-34 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein BAC0039 Protein 2e-33 41
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein BAC0596 Protein 6e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein VFG1702 Protein 3e-75 65
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein VFG1563 Protein 3e-74 64
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein VFG1390 Protein 8e-37 42
NT01EI_3734 YP_002935096.2 response regulator receiver domain protein VFG1389 Protein 2e-30 41