Gene Information

Name : NT01EI_0347 (NT01EI_0347)
Accession : YP_002931824.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 346996 - 349860 bp
Length : 2865 bp
Strand : +
Note : conserved hypothetical protein

DNA sequence :
ATGTTTTCTCTTTTCGGCCGTAAAAATGAAGTGAAACCCGATGGCACGGCAGGGCAGCCAGAGGGGGAGGTCTCTCCTCT
GGTTATTCACGGCCGGGAGCCACTGACGCGACCAGGCCGGATGACCCGGCAGGAAGAGGCAAAAGTGTATCACGCTAATC
CGTCCATCATTGATTATCTGCCATGGGTGGAATTCCTGGATGAAGATCAGTGTCTTCTGCTTGAGGACGGTATCTCCGTC
GGTGCCGTTTATGACGTGAAGCCAGTAGCCACGGAAGGGCGCACAAATGATCGTCTGGAGCAGATCCGCGATACGGTGGA
AGATGCCCTGCAGGACAGCTTTGATGAATATGATGAGAATCCCTGGGTGGTGCAGTTCTTCTGCCAGGATGAAGATGATG
CTGAAGCGTATCTGGACCACTTACGCGGCTACGTGAAACCGCATGCGCAGCGCACGGCATTTACGGAGGCTTGGCTGGGT
GAAATGGCACGTCATATCCGCAGTATCTCGCGGCCGGAGGGGCTGTTTACCGATGCGTTGATCACCGGTCAGCTGTGGCG
CGGCCAGCAGCGTCGCACCCGTATGGTTATTTATCGCTGGAGCGGGAAGTCCGCTTCCCGGGACCCGATGCCGCCGGTAG
CGATGCTCAACCAGGCGTGTGAACGTGTGGTCAGTGCGCTGGGCGGGGCCGGTATTCGTTGTACCCGTCAGAATGGCCTG
CAGGTGCACAGCTGGCTGCTGCGCCTGTTTAATCCGTCTCCGGACTGGGTGGATAAATCCACACTCTATCGTCAGGCGGC
GTATGCCGATCCGCGCGACTTCCCGGCGGGCGTGGCACCAGTCAGCAATGATTTTGCTGAAACGCTGTGGTTTACGCCAC
CCGTTTCGGATCCGGAGAACGGCGTATGGTGGATAGATAATAAACTACATTGTGCTCTGCCGGTTGAGAGACTGCGTACC
CCGCCGGAGCCAGGTACCATCACCGGTGAACAGGCCCGCGGTGAGAAAAAAATCAACGCACTGATGGATATGTTTCCAGA
AGGGACACTGCTGTGCATGACGATTGTTGTGCAGCCGCAGGACAGGCTGGAAGAACAGTTCAACCGCCTGTCGAAAAATG
CCGTCGGGGAGAATACCGAATCCGGCCGTGTCCGTCAGGATGTGAAAACGGTGAAAGAGTATCTGGGAAACCGGCATAAG
CTGTATCGTGCCGGGATCACCTTCCTTCTGCGCGGTGATGATATGGATAATCTTAAGCGCAAACGTCTTGATTTGACCAC
CGTATTGCTTGGGGCCGGCCTGCAGCCGGTTCGATCGGAATTTGAGGTGGGGCCGCTGAATACCTGGCTGCGGGCGCTGC
CAATGTGCTTTAACCCGAACAGCGATAAAAAACATTGGTACACCCGCCTGACCTGGGTACAGCACCTGGCAGGGTTGCTA
CCGGTTACCGGGCGGGAAACCGGTACCGGCAACCCGGGTTTCAGCTTTTTTAACCGCGGCGGTGATATTCTGACGTTTGA
TCCACTGAACAAGTATGACCGTACCCAGAATGCGCATCTGTTGTTGTTCGGACCGACGGGGGCAGGTAAATCAGCCACGC
TGTGTTATGCCTTTTCTCAACTGATGGCGGTTCACCGGCCACGTCTGTTTATCGCTGAAGCTGGGAACAGTTTTGGCCTG
CAGGCTGATTATTTTGAAAGCCTTGGACTTTCTGTCAACAAGATAAGCGTCAAACCGGGTAGTGGGGTCAGCCTGCCGCC
GTTTGCCGACGCGCATAAACTGGTCGAAGAAGGGCTGGCAGCACATGCCGTTGATGAGAGCGATCTCCCCGATATCGATG
CCGACAGTGACGGAGAGGGTGAAGACGAGGATAAGCGGGATATTCTCGGTGAGATGGAGATTTCAGCCCGCATGATGATA
ACGGGCGGCGATCCGAAAGAAGAAGCCGAAATGAAGCGTGCCGACCGGGCTATGATCCGTGAAGCGCTGCTGATGGCCGC
GCATGCAACATATAAAGAAGGGAGGCAGATGCTGCCTTCTGACCTGCAGAAAGCGTTATACAGCATTGCCGGTGATGACA
GCGATGAGGGGCAGAATGTCCGTAATGCCCAGCGTAAGGCGAAAGCCGCAGAGATGGCGGAGGCGCTGGGGATGTTCACT
CAGGAAGGCAGCTTTGAGGCGGAGCTGTTCAACCGCGAGGGGGAATTGTGGCCTGAAGCGGATGTGACCCTGGTGGATCT
CGGTCATCTGGCGCGTGAGGGTTATGAAGCGCAGATGGCGCTGACCATGGTGTCAATGACCAACATGATTAACAATATTG
CAGAGCGGGATCAGTATCTCGGCCGCGATATAGTCTTCGCGGTGGATGAGGCGCATATTGTGACGGTTAATCCACTGCTG
TCGCCGTATATGACCAAAGTGGTCAAAATGTGGCGAAAGTTAGGGGCCTGGCTGTGGCTGGCCACGCAGAACCTGAAGGA
CTTCCCGGATATTGCGGAGAAAATGCTGAACATGGCGGAGTGGTGGATTTGCCTCACCATGCCACCGGAAGAGGTGAAAG
ACATCAGCCGGTTCCGTGCACTCACGCCTGAACAGGAAGCCGTGCTGCTTTCCGCCCGTAAGCTGTCAGGTTGCTATACA
GAAGGGGTGGTGCTGGCCAAACGTATTGAGGCGCTGTTCCGTGCTGTTCCCCCCAGTCTGTATCTTGCGCTGGGCATGAC
GGAGAAAGAGGAAAAGGCGGAACGCCGGGCGCTGATGCGTGAGCATCACTGTAGCGAACTGGACGCGGCGAAGCTGATTG
CCCGTAAACTGGACCGGTTGCGCGGACTGACTGACGCACACGACGAGGAGAGCACTGCAGCATGA

Protein sequence :
MFSLFGRKNEVKPDGTAGQPEGEVSPLVIHGREPLTRPGRMTRQEEAKVYHANPSIIDYLPWVEFLDEDQCLLLEDGISV
GAVYDVKPVATEGRTNDRLEQIRDTVEDALQDSFDEYDENPWVVQFFCQDEDDAEAYLDHLRGYVKPHAQRTAFTEAWLG
EMARHIRSISRPEGLFTDALITGQLWRGQQRRTRMVIYRWSGKSASRDPMPPVAMLNQACERVVSALGGAGIRCTRQNGL
QVHSWLLRLFNPSPDWVDKSTLYRQAAYADPRDFPAGVAPVSNDFAETLWFTPPVSDPENGVWWIDNKLHCALPVERLRT
PPEPGTITGEQARGEKKINALMDMFPEGTLLCMTIVVQPQDRLEEQFNRLSKNAVGENTESGRVRQDVKTVKEYLGNRHK
LYRAGITFLLRGDDMDNLKRKRLDLTTVLLGAGLQPVRSEFEVGPLNTWLRALPMCFNPNSDKKHWYTRLTWVQHLAGLL
PVTGRETGTGNPGFSFFNRGGDILTFDPLNKYDRTQNAHLLLFGPTGAGKSATLCYAFSQLMAVHRPRLFIAEAGNSFGL
QADYFESLGLSVNKISVKPGSGVSLPPFADAHKLVEEGLAAHAVDESDLPDIDADSDGEGEDEDKRDILGEMEISARMMI
TGGDPKEEAEMKRADRAMIREALLMAAHATYKEGRQMLPSDLQKALYSIAGDDSDEGQNVRNAQRKAKAAEMAEALGMFT
QEGSFEAELFNREGELWPEADVTLVDLGHLAREGYEAQMALTMVSMTNMINNIAERDQYLGRDIVFAVDEAHIVTVNPLL
SPYMTKVVKMWRKLGAWLWLATQNLKDFPDIAEKMLNMAEWWICLTMPPEEVKDISRFRALTPEQEAVLLSARKLSGCYT
EGVVLAKRIEALFRAVPPSLYLALGMTEKEEKAERRALMREHHCSELDAAKLIARKLDRLRGLTDAHDEESTAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2576 YP_002152295.1 hypothetical protein Not tested Not named Protein 0.0 71
STY4573 NP_458658.1 hypothetical protein Not tested SPI-7 Protein 0.0 66
YE3482 YP_001007641.1 hypothetical protein Not tested YAPI Protein 0.0 65
YpsIP31758_3705 YP_001402659.1 hypothetical protein Not tested YAPI Protein 0.0 64
api39 CAF28513.1 hypothetical protein Not tested YAPI Protein 0.0 64
ORF C47 AAN62141.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 51
ORF SG57 AAN62279.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 50
Pmu_03070 YP_005176206.1 conjugative transfer ATPase TraC-like, PFL family Not tested ICEPmu1 Protein 0.0 49
unnamed ABR13362.1 hypothetical protein Not tested PAGI-5 Protein 0.0 48
EXA33 ABD94642.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 48
RL022 AAP84149.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 48
virB4 CAI36125.1 VirB4 component Not tested PPHGI-1 Protein 0.0 48