Gene Information

Name : NT01EI_0345 (NT01EI_0345)
Accession : YP_002931822.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1579
EC number : -
Position : 345050 - 346564 bp
Length : 1515 bp
Strand : +
Note : conserved hypothetical protein

DNA sequence :
ATGCAGATTAAGTCCAATGCCATGGTGAAATTTATTGTTCCCGCAGTGGTGGTGGCGGGTCTGGTTGTGGGCCTGAAAAG
CTGTAAGGGAGAACGGCTACCTGAGAATGCTGAGAATGCATCGGGTGATGTGACGACGGTACTGAAAAATCTCTCGCAGG
ATGAGCTTAAGGCGCTCGGGGTGGAGGGTGACACGCCGGAAGATACCCTGCGTATGCTGATAGGCCGGCTGAACGATGTG
CGTGATCGCCAGAAAACGCTGGATAAGCAGAATACCGATCTGCTGAAAGAGAATGAGCAACTGCGTAAGCGCGGCACGAA
TGTATCCGGTCAGGTTGACGAGGCAGTACAGGGGTTGCGTGAAGAGTATGACAAACGTCAGCAGCAACTGCAGAACGAAC
AGACCAGCCTGCTGGAAAAAGTGCAGACGCTGTCTGAACAGCTGAAAACCACCGTCAGTAGTTCAGCGGGTGCAAAACAG
GCTTCTGACAGCGATATTCCCCTGGGCCTCGGTCTGGATGGTCTGGGGGGCCGCACCCGTGGTATCGCCACCCGGGGCGA
TGACGGGCTGATGTGGGTGACGCCTGACGATCAAAAAGACGTCGATCCGCGCGATGCTGCCAGCGGTAAGGCTTCACCGC
AGTTTCCCACCTCGTTTCTGGACAGCAATCCCCTGACCCGGCAGAAAGCGGCTTATGAGCAGCAGGTTAAGGGTCATACC
GGTGAAAAAGGGGCTCAGGAAAACGCAGAGCCTGTCTATACCCTGCCGGAAAACTCCACCCTGGTGGGAAGCCGGGCAAT
GACGGCATTGCTGGGCCGTATTCCGCTCAACGGCACTGTGACCGATCCGTATCCATTCAAGGTGCTAATTGGTAAAGATA
ATCTCACGGCTAATGGTATTGAACTACCGGATGTGGAGGGGGCGATTGTTTCCGGCAGCGCCAGCGGAGACTGGACGCTC
TCCTGCGTTCGGGGGCAGGTGAACAGCATCACCTTTGTTTTTGCTGACGGTACGGTCCGTACCGTGCCTCAACCGGAAGC
CAGCGGGAAAAGCACCGGTAATGGCAATACGCAGAATAAAACCGGTACCGACGGCGGTATTGGCTGGATTTCAGATGATG
ATGGTATTCCGTGTATCAGCGGTACCCGCAAGTCTAACGCGTCAACGTATCTGCCCACTATCTTTGCTCTTTCTGCCGCC
GGGGCCGCCGGGGAAGCATTCGGTGAAGGGCAATATACCACCCAGAACAATGTAAACGGGATTTCCTCCACGCTGACCGG
CAGTGCCGGCGAAGCGGCGCTGGGGAAAGCCCTCTCCGGTGGCATGAGTGAGACAACCGACTGGGTTAAGCAGCGCTATG
GACAGACATTTGACGCGATTTATGTACCACCGGGTGCGAAGCTGGCCGTACATATTACCCGCCAGCTTGCCATTGACTAT
GAAGATAACGGTCGCAGGGTTCGCTACGATTTCACCCTCCCGGGTGGGGTCAGCGACAACGGCGGTCTGGACTAA

Protein sequence :
MQIKSNAMVKFIVPAVVVAGLVVGLKSCKGERLPENAENASGDVTTVLKNLSQDELKALGVEGDTPEDTLRMLIGRLNDV
RDRQKTLDKQNTDLLKENEQLRKRGTNVSGQVDEAVQGLREEYDKRQQQLQNEQTSLLEKVQTLSEQLKTTVSSSAGAKQ
ASDSDIPLGLGLDGLGGRTRGIATRGDDGLMWVTPDDQKDVDPRDAASGKASPQFPTSFLDSNPLTRQKAAYEQQVKGHT
GEKGAQENAEPVYTLPENSTLVGSRAMTALLGRIPLNGTVTDPYPFKVLIGKDNLTANGIELPDVEGAIVSGSASGDWTL
SCVRGQVNSITFVFADGTVRTVPQPEASGKSTGNGNTQNKTGTDGGIGWISDDDGIPCISGTRKSNASTYLPTIFALSAA
GAAGEAFGEGQYTTQNNVNGISSTLTGSAGEAALGKALSGGMSETTDWVKQRYGQTFDAIYVPPGAKLAVHITRQLAIDY
EDNGRRVRYDFTLPGGVSDNGGLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4570 NP_458655.1 putative exported protein Not tested SPI-7 Protein 8e-109 55
t4268 NP_807865.1 hypothetical protein Not tested SPI-7 Protein 1e-109 55
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 3e-115 53
YE3484 YP_001007643.1 hypothetical protein Not tested YAPI Protein 1e-94 51
api37 CAF28511.1 putative exported protein Not tested YAPI Protein 7e-98 49
YpsIP31758_3707 YP_001402661.1 hypothetical protein Not tested YAPI Protein 3e-97 49
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-66 42
ORF SG59 AAN62281.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-62 41
pph82 CAI36123.1 hypothetical protein Not tested PPHGI-1 Protein 7e-67 41