|
Name : NT01EI_3413 (NT01EI_3413) Accession : YP_002934785.1 Strain : Edwardsiella ictaluri 93-146 Genome accession: NC_012779 Putative virulence/resistance : Virulence Product : Orn/Lys/Arg decarboxylase family, putative Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 3300900 - 3303035 bp Length : 2136 bp Strand : + Note : - DNA sequence : ATGAAAGACATTCTGTTCCTGTGTAACCCCTCGCCGACCTTCAAGCGCATCCCGCTGGAGGAGCTGTACGCCCAGCTGCG CAATCGGGGTTTTAACATCATCGAAAGCACCTCGGTAGACGATCTGCTGGATCTGGTACGCAATAACGCCCAGCTGGCCG GGGTGGTCTTCGACTGGGACACCTACAGTCTGGATCTGTGCCAGCACATCACGGCGCTGAACGAGATGCTGCCGCTGTAT GCCTTCACCAACACCCACTCCACGCTGGATGTCAGCCTGGGCGACCTGCGCATGAATATTCAGTTCTTTGAGTATACGCT GGGCGGCGCTGCCGACATCGCCGACAAGATCCGCCAGGGAACCGATGGCTATATCGATGCCATTATGCCGCCGCTGACCA AGGCGCTGTTCAACTATGTCAAAGAGGGGAAATACACCTTCTGTACCCCGGGCCACATGGGCGGTACCGCATTCCAGAAA AGCCCGGTTGGCAGCCTGTTCTATGACTTCTTTGGCGCCAACACCATGAAGTCCGACATCTCCATTTCCGTCTCCGAGCT GGGCTCCCTGCTGGACCACTCAGGCCCGCACAAAGAGGCGGAAGAGTATATCGCCCGTACCTTCAACGCCGATCGCAGCT ACATGGTGACCAACGGCACCTCCACCGCCAACAAGATCGTCGGCATGTACTCCGCCCCGGCCGGCAGCACCATCCTGATC GACCGCAACTGTCACAAGTCGCTCACCCACCTGATGATGATGAGCGACGTTATCCCGATCTACCTGCGGCCGACCCGCAA CGCCTACGGTATTCTGGGCGGCATTCCGCAGAGCGAGTTCACCCACGACACCATCGCCAAACGGGTGAAGGATACCCCAA ACGCCACCTGGCCGGTACACGCCGTGGTGACCAACTCCACCTATGACGGCCTGTTCTACAACGCGGAGTACATCAAGAAA ACCCTGGATGTAAAATCCATCCACTTTGACTCCGCCTGGGTGCCCTACACCAACTTCAGCCCGATCTATAAAGGCCTGTG TGGCATGAGCGGTGGTCGTGTAGAAGGCAAGGTTATCTACGAAACCCAGTCCACCCACAAACTGCTGGCGGCCTTCTCGC AGGCGTCCATGATCCACGTGAAAGGCGACTTCAACCAGGAAACCTTCAACGAAGCCTACATGATGCACACCTCCACCTCA CCGCACTACGGCATCGTGGCCTCCATCGAAACCGCGGCGGCGATGATGAAGGGCCACGCCGGTAAACGCCTGATCGATGA CTCTATCGCGCGGGCCATCCGCTTCCGTAAGGAGATCAAGCGCCTGCGCAGCGAATCCGACAGCTGGTTCTTCGACGTCT GGCAGCCGGATAATATTGACCAGGTCGCCTGCTGGAAACTGGATCCGCAAGCGTCCTGGCACGGCTTCAAGGGCATCGAT GACAACCACATGTACCTCGACCCGGTCAAGGTCACCCTGCTGACCCCGGGGATGAAGGAAGATGGCACCATGGCAGACAC CGGTATCCCGGCCTCCATCGTGGCCAAATACCTGGATGAGCATGGCATCATCGTTGAGAAGACCGGTCCGTACAACCTGC TGTTCCTGTTCAGCATCGGTATCGACAAGACCAAGGCCATGAGTCTGCTGCGTGGTCTGACTGACTTCAAACGTGCCTAT GACCTGAACCTGCGCGTTAAGAACATGCTGCCCTCACTGTACCGTGAAGATCCGGAGTTCTATGAAAACATGCGTATCCA GGAACTGGCCCAGGGCATCCACGCGCTGATCCAGCATCACAACCTGCCGGATCTGATGTACCGTGCCTTCGAAGTTCTGC CGACCATGGTGATGAACCCGCACAACGCCTTCCAACAGGAGCTGCGCGGCCAGGCCGAAGAGGTCTACCTCGACGAGATG ATCGGCAAGGTCAACGCCAACATGATCCTGCCGTACCCGCCGGGAGTTCCGCTGGTAATGCCGGGTGAAATGCTGACCGA AGAAAGCCGTCCGGTGCTGGAGTTTCTGCAGATGCTGTGCGAAATCGGCGCCCACTATCCGGGCTTCGAAACCGACATCC ACGGCGCCTATCGTCAGGCCGACGGGCGCTATACGGTGAAAGTGCTCAGGCAGTAG Protein sequence : MKDILFLCNPSPTFKRIPLEELYAQLRNRGFNIIESTSVDDLLDLVRNNAQLAGVVFDWDTYSLDLCQHITALNEMLPLY AFTNTHSTLDVSLGDLRMNIQFFEYTLGGAADIADKIRQGTDGYIDAIMPPLTKALFNYVKEGKYTFCTPGHMGGTAFQK SPVGSLFYDFFGANTMKSDISISVSELGSLLDHSGPHKEAEEYIARTFNADRSYMVTNGTSTANKIVGMYSAPAGSTILI DRNCHKSLTHLMMMSDVIPIYLRPTRNAYGILGGIPQSEFTHDTIAKRVKDTPNATWPVHAVVTNSTYDGLFYNAEYIKK TLDVKSIHFDSAWVPYTNFSPIYKGLCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDFNQETFNEAYMMHTSTS PHYGIVASIETAAAMMKGHAGKRLIDDSIARAIRFRKEIKRLRSESDSWFFDVWQPDNIDQVACWKLDPQASWHGFKGID DNHMYLDPVKVTLLTPGMKEDGTMADTGIPASIVAKYLDEHGIIVEKTGPYNLLFLFSIGIDKTKAMSLLRGLTDFKRAY DLNLRVKNMLPSLYREDPEFYENMRIQELAQGIHALIQHHNLPDLMYRAFEVLPTMVMNPHNAFQQELRGQAEEVYLDEM IGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 83 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NT01EI_3413 | YP_002934785.1 | Orn/Lys/Arg decarboxylase family, putative | VFG1670 | Protein | 0.0 | 67 |
