Gene Information

Name : NT01EI_3342 (NT01EI_3342)
Accession : YP_002934715.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD, putative
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3227338 - 3228237 bp
Length : 900 bp
Strand : -
Note : -

DNA sequence :
GTGCACGAGCAGGATCAGGCGTTGATCGAACAATTTTTGGATGCGCTGTGGCTGGAGAAGAATCTGGCGGAGAATACCCT
GGCCTCCTATCGTCAGGATCTGCGCACGCTGGCCGAATGGCTGGCCTGTCACGATCTTACTCTGCTGACGGCGGCGCACG
GCGATCTGCAGGACTTCTTTGCCCAACGTATGGATGGGGGCTATAAGGCGTCCAGCTCGGCCCGTCTGCTCAGCGCGCTG
CGCCGCTGTTACCAGTATCTGTACCGGGAGACGCTGCGCGGAGACGATCCGAGCGCGTTGCTGGCCTCGCCCAAACTGCC
GCAACGGTTGCCGAAAGATCTTTCTGAAGCCCAGGTGGATGCCCTGCTGCAGGCGCCCTCCATTGATACGCCGCTGGAGC
TGCGTGATAAGGCGATGCTGGAGCTGCTGTACGCCACCGGCCTGCGGGTGTCCGAACTGGTGGGGCTGGCGCAGGAGGAT
ATCAGCCTGCGTCAGGGCGTGGTACGGGTGATCGGCAAAGGCAATAAAGAGCGCCTGGTTCCCCTTGGGGAGGAGGCTAT
CTACTGGATTGAGTACTATCTGGAGTATGGCCGTCCGTGGCTGGTGAACGGCCAGACGGTAGCGGCGCTGTTTCCCAGCA
ATCGCGCCCGCCAGATGACGCGCCAGACTTTCTGGCATCGGATTAAGCACTATGCTGTCCTGGCGGGGATCGATGGGGAT
CGCCTGTCACCGCACGTGCTGCGCCATGCGTTTGCCACCCATCTGTTGAACCATGGCGCGGATTTACGTGTCGTACAGAT
GCTTTTGGGGCACAGCGATCTTTCTACTACCCAGATTTATACCCATGTAGCGACAGAGCGTCTGCGACAGCTACATCAAC
AGCATCATCCCCGCGCCTGA

Protein sequence :
MHEQDQALIEQFLDALWLEKNLAENTLASYRQDLRTLAEWLACHDLTLLTAAHGDLQDFFAQRMDGGYKASSSARLLSAL
RRCYQYLYRETLRGDDPSALLASPKLPQRLPKDLSEAQVDALLQAPSIDTPLELRDKAMLELLYATGLRVSELVGLAQED
ISLRQGVVRVIGKGNKERLVPLGEEAIYWIEYYLEYGRPWLVNGQTVAALFPSNRARQMTRQTFWHRIKHYAVLAGIDGD
RLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-55 61
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-55 61