Gene Information

Name : NT01EI_3249 (NT01EI_3249)
Accession : YP_002934625.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS, putative
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 3125815 - 3128373 bp
Length : 2559 bp
Strand : +
Note : -

DNA sequence :
ATGACCACCACGGACAATCTTGACGCTCACACCCCCATGATGCAGCAGTATCTGCGTCTCAAGGCGCAGCACCCAGACAT
CCTGCTGTTTTACCGAATGGGAGACTTTTACGAACTGTTTTATGACGATGCCCGCCGTGCGTCACAGCTGCTGGATATCT
CCCTGACCAAACGCGGCGCCTCTGCCGGGGAGCCAATCCCGATGGCTGGTGTGCCTTATCACGCGGTAGAAAACTACTTG
GCCAAGCTGGTGCAGCTGGGGGAGTCGGTGGCTATCTGCGAACAGATTGGCGATCCTGCCGCCAGCAAGGGACCGGTAGA
GCGTAAGGTGGTACGGATCGTTACACCGGGCACCGTCAGCGATGAGGCCCTGCTCAGCGAGCGGCAGGACAACCTGCTGG
CGGCGATCTGGCAATCGCCCAACGGCTTTGGCTACGCCACGTTGGATATCAGCTCCGGACGCTTCCGTGCTGCCGAGCCG
CAGGACGCCGATAGCATGGCCGCGGAGCTGCAGCGCACCAATCCTGCGGAGCTGCTCTACCCAGAGGAGTTTACCTCCAT
GGCGCTGATCGAGCAGCGCCGTGGGCTGCGCCGCCGCCCGATGTGGGAGTTCGAGCTGGAAACCGCCCGCCAGCAGCTCA
ACCTACAGTTCGGCACCCGCGATCTGAGCGGCTTTGGCGTCGAACAGGCCCCCCAGGCGCTGCGCGCAGCCGGCTGCCTG
CTGCAGTATGCCAAAGATACCCAGCGCACCATGCTGCCCCATATCCGCGCCATCACCATGGAGCGCCAGCAGGACGGCAT
CATTATGGACGCCGCCACCCGGCGTAATCTGGAGCTGACCCAGAATCTGGCCGGGGGGCAGGAAAATACCCTGGCAGCAG
TGCTGGATGCCAGCGTCACCGCGATGGGCAGCCGGATGCTCAAGCGCTGGCTACATATGCCGATCCGCGATCGCCAGGCG
CTGCAGCGGCGTCAGGATGCCATCGAGGCGCTGCTGCCGCTGATTGACGATCTGCAGCCCCTGCTGCGCCAGGTCGGCGA
TCTGGAGCGCATTCTGGCCCGGCTGGCGCTGCGCAGCGCCCGTCCACGCGATCTGGCACGCATGCGTGTCGCCTTCCAGC
AGTTGCCAACCCTGCAAACCCTGCTCGGCGAGCGCGGCAGTGAGGCGCTGGCGCCGCTGGCGCGTCAGGCTGGCCGCTTC
GATGCCCTGTGCGAACTGCTGGAGCGGGCGCTGGTCGAAACGCCGCCGGTGCTGGTACGCGACGGCGGCGTGATCGCCAG
CGGCTATCACGCCGAGCTCGACGAGTGGCGTGCACTGGCGGACGGCGCCAGCGACTACCTCGACCGGCTGGAGGTCCGCG
AGCGTGAGAAGCTGGGGCTGGATACCCTGAAGGTCGGCTTTAACGCGGTGCATGGCTACTATATTCAGGTCAGCCGTGGA
CAGAGTCACCTGGTGCCTATCCACTACGTTCGCCGCCAGACGCTGAAAAACGCCGAGCGCTACATTATCCCCGAACTGAA
AGAGTATGAGGATAAGGTACTGACCTCGAAGGGCAAGGCGCTGGCGCTGGAGAAGCAGCTGTATGACGAGCTGTTCGACC
TGCTGCTGCCGCACCTGGCGGCGCTACAGCAGAGCGCGACGGCGCTGGCCGAGCTGGACGTCCTGAGCGGCCTGGCCGAG
CGGGCCGACCGCTACGGCTACGTCCGCCCACAGCTGAGCGAACGCACCGGGATCAATATCGACGAGGGGCGACACCCGGT
CGTGGAGCAGGTGCTCAGGGAGCCCTTCATCGCCAACCCGCTGACCCTGTCCGGCGCACGGCGCATGCTGGTGATCACCG
GCCCCAACATGGGCGGCAAGAGCACCTACATGCGCCAGGCGGCGCTGATCGTGCTGATGGCGCACATCGGCAGCTTCGTC
CCGGCGCAGCGCGCCGTCATCGGCCCGGTCGATCGCATCTTTACCCGCGTCGGCGCCGCCGACGATCTGGCCTCCGGCCG
CTCCACCTTTATGGTGGAGATGACCGAAACGGCCAATATCCTACACAACGCGACCGAGCACAGTCTGGTGCTGATGGATG
AGATTGGCCGCGGCACCTCCACCTACGACGGCCTGTCGCTGGCCTGGGCCTGCGCCGAAAGTCTGGCCAGCCGTATCAAG
GCGATGACGCTGTTCGCCACCCACTACTTCGAGCTGACCACCCTGCCGGAAAAGCTGGAGGGGGTCTACAACGTGCATCT
GGACGCGCTGGAGCACGGCGAGACCATCGCCTTTATGCACAGCGTGCAGGACGGCGCGGCCAGTAAGAGCTATGGGCTGG
CGGTGGCGGCATTGGCCGGAGTGCCACGCGAGGTGATCAAACGCGCGCGCCAGAAACTGCGTGAGCTGGAAACCTTATCG
CAGCACGGCAACCAGAGCCAGGCAGACGGCGCCCAACTGCCACTGCTGGTCGAGGCGGAGCCGTCGGCGGCGCTGGAAGC
GCTGACCGCTATCGATCCCGATGTGCTGACGCCGCGCCAGGCGCTGGACTGGCTCTATCGCCTCAAGGGGATGCTATAG

Protein sequence :
MTTTDNLDAHTPMMQQYLRLKAQHPDILLFYRMGDFYELFYDDARRASQLLDISLTKRGASAGEPIPMAGVPYHAVENYL
AKLVQLGESVAICEQIGDPAASKGPVERKVVRIVTPGTVSDEALLSERQDNLLAAIWQSPNGFGYATLDISSGRFRAAEP
QDADSMAAELQRTNPAELLYPEEFTSMALIEQRRGLRRRPMWEFELETARQQLNLQFGTRDLSGFGVEQAPQALRAAGCL
LQYAKDTQRTMLPHIRAITMERQQDGIIMDAATRRNLELTQNLAGGQENTLAAVLDASVTAMGSRMLKRWLHMPIRDRQA
LQRRQDAIEALLPLIDDLQPLLRQVGDLERILARLALRSARPRDLARMRVAFQQLPTLQTLLGERGSEALAPLARQAGRF
DALCELLERALVETPPVLVRDGGVIASGYHAELDEWRALADGASDYLDRLEVREREKLGLDTLKVGFNAVHGYYIQVSRG
QSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLAALQQSATALAELDVLSGLAE
RADRYGYVRPQLSERTGINIDEGRHPVVEQVLREPFIANPLTLSGARRMLVITGPNMGGKSTYMRQAALIVLMAHIGSFV
PAQRAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAESLASRIK
AMTLFATHYFELTTLPEKLEGVYNVHLDALEHGETIAFMHSVQDGAASKSYGLAVAALAGVPREVIKRARQKLRELETLS
QHGNQSQADGAQLPLLVEAEPSAALEALTAIDPDVLTPRQALDWLYRLKGML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_3249 YP_002934625.1 DNA mismatch repair protein MutS, putative VFG0562 Protein 0.0 80