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Name : NT01EI_0325 (NT01EI_0325) Accession : YP_002931802.1 Strain : Edwardsiella ictaluri 93-146 Genome accession: NC_012779 Putative virulence/resistance : Unknown Product : DNA topoisomerase 3 , putative Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 329712 - 331742 bp Length : 2031 bp Strand : + Note : - DNA sequence : ATGCAGCTTTATCTGTGTGAAAAACCGTCTCAGGCGAAAGATATTGCACGGGTTCTCGGTATCAGCAAACGGGGACAGGG ATTTATCAGCGCTGACAATATCACTGTCACCTGGGCTATTGGCCATCTGCTGGAGCAGGCCAGCCCAGATGCTTATGGCG AACAGTTTGGTAAACCCTGGCGGGTCGATGTGCTCCCGGTTTTACCGGATAACTGGAAAATGGTGGTCAAACCTCAGACC CGGGATCAGTTCACGGTTATCAGTAAGTTGCTGAAGCAGGCCGGAGAGGTGATTATTGCCACCGATGCTGACAGGGAGGG TGAGGTTATCGCCCGTGAGCTGCTGGCGTATTGTGGATATCGTGGCGCAGTACGTCGGTTGTGGTTATCCGCGCTTGACG AAGCCAGTATCCGCGAGGCTCTGGCCGGTATTCTTCCTGGGGAAAATACGGCAAAACTGTATGACGCCGGACTGGGACGC AGCAGGGCGGACTGGCTTATCGGGATGAATCTGACCCGGTTGTATACCCTGATAGCCCGCGAGTCCGGTGTTTCTGATGT GTTGTCTGTTGGTCGGGTTCAGACACCGACGCTGGCCATTGTGGTTAACCGTGATAAAGAAATCGCTGATTTTGTCCCGG TCCCCTGGTGGCAGGTGCAGGTTCTGCTTGAGAAAGATGGCGTGCGCTTCAGGGCGACCTGGCAGGCGGCGGCGCAGTAC TGCGATGACGAAAAGCGCTGCGTGAATAAGCAGGCTGCGAACGCTGTCGGACAACTCTGCCAGCAGCAGAAAGGTGCAAC AGTACTGGAAGTGAGTCAAAAGCGTGATAAAACACCGGCTCCGCTTTGCTTCGATCTGGGAACGCTGCAGCTGGTTTGCT CCCGTAAATTCGGGATGGGGGCCAAAGAGACGCTGGCTGTTGCTCAGTCATTATATGAGACGCACAAAGCGACGACCTAT CCACGGACCGACTGTGGTTATCTTCCGACATCAATGCAGAAGGAAATACCGGAAGTAATGGGCTCTGTTGCCAAATCCGA TCCGTCAGTGGCACCGGTGCTGGCTCAACTGGACCGCGGGTTTGTCTCCCGGGTCTGGAATGATAAAAAAATCACGGCAC ACCATGCCATTATTCCTACACGTCAGGCATTTGACCTCTCGCGCCTCAGCGCGGATGAGCTGAAGGTTTATCAGCTTATT CGACAGCATTATTTTGCCCAGTTCCTGCCGTTGCAGGAGTCTGATGTGACCGATGCTTCTTTTAATATCGGCGGCCAGTT GTTCCTAGCCAAGGGGAAAGTCAATGTTATAACGGGCTGGACGTGTTTGTTTCAGAAAGAGATTCAGGAAGATCCGCCGG AGGATGATGATATGGCGTTGCCAGCTCTGAACAAAGGTGACAGTTGTATCGTAAATGGCGCCAGTGTCGGGGATAAGGTC ACCAGTCCACCAAAACCGTTTACCGAGGGCACGCTGATTGCCGCGATGAAAAATGCTGCCAGTTTCGTCAGCGATCCGAA GCTGAAAAAAGTGCTGCGCGATAATGCGGGACTGGGAACCGAAGCGACCCGGGCCGGTGTGCTTGAGACACTTTTCTCCC GTCATTACCTGGAGAAAAAAGGCAAACATATCCACGCCACACTGCTTGCCAGGGAACTGATAGCGGCGTTGCCCGAAACG CTGACCAGCCCTGGCATGACCGCGCTGTGGGAACAGGCGCTGGACGATATTGCTCAGGGAAAAATGTCGCTGGACACCTT TATACAAAAACAGCTGCAGTGGACCCGTCATCTGGTTGACAAAGGGCGAGCGGATACAGTGAAAATTACTGCGCCTGTGA CGCCTCCCTGCCCGGTCTGTAAGGGCCTGACCCGCAAGCGTAAGGGAAAAAACGGAGACTTCTGGGGGTGTATTCGTTAT CCGGAATGTAACGGTATTGTGGCGGGAAAAAGCGGTGGGAAAGGCCGGAAAATCGCGCGGGGCAAAAAAACGGTAGTAAA TACGGAAGTGGAATTATCTGCCTCGCAATAA Protein sequence : MQLYLCEKPSQAKDIARVLGISKRGQGFISADNITVTWAIGHLLEQASPDAYGEQFGKPWRVDVLPVLPDNWKMVVKPQT RDQFTVISKLLKQAGEVIIATDADREGEVIARELLAYCGYRGAVRRLWLSALDEASIREALAGILPGENTAKLYDAGLGR SRADWLIGMNLTRLYTLIARESGVSDVLSVGRVQTPTLAIVVNRDKEIADFVPVPWWQVQVLLEKDGVRFRATWQAAAQY CDDEKRCVNKQAANAVGQLCQQQKGATVLEVSQKRDKTPAPLCFDLGTLQLVCSRKFGMGAKETLAVAQSLYETHKATTY PRTDCGYLPTSMQKEIPEVMGSVAKSDPSVAPVLAQLDRGFVSRVWNDKKITAHHAIIPTRQAFDLSRLSADELKVYQLI RQHYFAQFLPLQESDVTDASFNIGGQLFLAKGKVNVITGWTCLFQKEIQEDPPEDDDMALPALNKGDSCIVNGASVGDKV TSPPKPFTEGTLIAAMKNAASFVSDPKLKKVLRDNAGLGTEATRAGVLETLFSRHYLEKKGKHIHATLLARELIAALPET LTSPGMTALWEQALDDIAQGKMSLDTFIQKQLQWTRHLVDKGRADTVKITAPVTPPCPVCKGLTRKRKGKNGDFWGCIRY PECNGIVAGKSGGKGRKIARGKKTVVNTEVELSASQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 59 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 59 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 0.0 | 59 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 0.0 | 58 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 5e-172 | 54 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 6e-166 | 51 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 2e-161 | 51 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 7e-153 | 48 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 8e-130 | 43 |
