Gene Information

Name : NT01EI_3117 (NT01EI_3117)
Accession : YP_002934502.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Unknown
Product : phage portal protein, PBSX family, putative
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 3004205 - 3005191 bp
Length : 987 bp
Strand : -
Note : -

DNA sequence :
ATGAATAACACTATCGCTTTTACATTCGGTGAACCGGAAGCCCTGTTGGACAGGCGGGAAATACTGAATTATCTGGAGTG
CGTGGACTTTGGCAAATGGTATGCGCCGCCGGTGGATTTCAACTCGCTGGCGCTGTCGTTTCGCGCTTCGGCACACCATA
CCAGCCCGATCTGCGTGAAGCGCAACGTGCTGGTTGGCACCTTCATTCCCCATCCGCTGCTGACCCGGCAGGCATTCAGC
CGCCTTGCGCTGGACTATCTGGTGTTTGGCAACGCTTATCTGGAGCGGCAGGAAAACCGGATGGGCCAGCCGTTAAAACT
GGTACCGGCGCTGGCGAAATACGTCCGGCGCGGCAAGGCGCTGGATAACTATTTCTTTGTCCAGCCAGGTCAAGTGGATC
ACGAGTTTACGCCGGGTAGCATTGGCCACCTGCTGGAGCCGGATATCAACCAGGAAATCTATGGCCTGCCGGAGTACCTG
TCCGCCCTGAATGCGGCATGGCTGGATAACGCCGCCACGCTGTTCCGCCGCCGTTACTACAAGAACGGCAGTCATGCCGG
TTTCATCCTCTACCTGAGCGATCCGGCTCATAACGAAGCAGATATCGAAGCATTGCAGGAGGCGCTGGCGGATAGCCGTG
GCCCCGGCAACTTCCGTAATCTGCTGATGTACCTGCCGAACGGTAAGCCGGACAGCGTGAAGGTGATCCCGATCGGCGAA
GTGGCGGCGAAAGATAACTTCTCCGATATCAAAAGCGTCAGCCGCGACGATCAGCTAGCCGCGCACCGGGTGCCGCCAGC
CCTGATGGGCGCAGTGCCGAGTAACGCGGGTGGCTTTGGCGATGCTATCAAAGCGGCGAAGGTATTCAACTGCAACGAGA
TCGAACCGCTGCAGGAGCGGTTCAAGGAACTTAACGACTGGCTGGGGCTGGAGGTTATTCGCTTCAGAAAGTACCGCCTT
GCCGACGACAACGCAGCGCAATCCTGA

Protein sequence :
MNNTIAFTFGEPEALLDRREILNYLECVDFGKWYAPPVDFNSLALSFRASAHHTSPICVKRNVLVGTFIPHPLLTRQAFS
RLALDYLVFGNAYLERQENRMGQPLKLVPALAKYVRRGKALDNYFFVQPGQVDHEFTPGSIGHLLEPDINQEIYGLPEYL
SALNAAWLDNAATLFRRRYYKNGSHAGFILYLSDPAHNEADIEALQEALADSRGPGNFRNLLMYLPNGKPDSVKVIPIGE
VAAKDNFSDIKSVSRDDQLAAHRVPPALMGAVPSNAGGFGDAIKAAKVFNCNEIEPLQERFKELNDWLGLEVIRFRKYRL
ADDNAAQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 6e-103 61
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 6e-103 61
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 6e-82 53