Gene Information

Name : NT01EI_3052 (NT01EI_3052)
Accession : YP_002934439.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Unknown
Product : integrase core domain protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2936942 - 2937697 bp
Length : 756 bp
Strand : +
Note : -

DNA sequence : 
ATGATGCAAAGCCGCACGGTGTATAACTATCGTAGCTGCCGTGATGATCGGGCCGTCACCTTACGGATAAGGGAAATAGC
TGAAACCCGCATTCGCTACGGAGTTCAGCGTATTCATATTCTTCTACGCCGCGAAGGTTGGCTGATTAATCATAAGAAAA
CACACCGAATTTATTGTCAGGAAGGTCTGAATTTACGGACGAAACGCCCCCGACGGCATGTGACAGCCCGGCAGAGAAGC
GTCCGTCCGGAAGTGACGGCCATAGACCAGTGCTGGAGCATGGACTTCGTTGCTGATAATCTGTTCAACGGACGCCGTAT
CCGTGCATTGACTGTAGTCGATAATTTTAGTCGTGAGTGCCTGGCGATCCATGTAGGTCAGGGGCTACGTGGGGAAGATG
TCGTCACGGTGATGGCGCGTTTAAAAGCGTTAAGACAGCGGGTTCCCGAACGGCTTCAGACAGACAATGGCAGTGAATTT
ATATCTAAAGCGCTGGATCACTGGGCATATGAAAATGGTATAACAATGGACTTCTCACGGCCGGGAAAACCGACGGATAA
TGCGCTGATCGAGTCATTTAACGGCAGTGTTCGGGATGAGTGTCTGAACGTTCATTGGTTCCTGTCACTGGACGATGCGC
AGGAAAAGATCGAGCAGTGGCGACAGGAATATAATCGAAGCAGACCCCATTCATCGTTAAATAACCAGACTCCGGAGGAA
TTCATCCAAATCCTGCAAAAAGGCCCGGATCTCTGA

Protein sequence : 
MMQSRTVYNYRSCRDDRAVTLRIREIAETRIRYGVQRIHILLRREGWLINHKKTHRIYCQEGLNLRTKRPRRHVTARQRS
VRPEVTAIDQCWSMDFVADNLFNGRRIRALTVVDNFSRECLAIHVGQGLRGEDVVTVMARLKALRQRVPERLQTDNGSEF
ISKALDHWAYENGITMDFSRPGKPTDNALIESFNGSVRDECLNVHWFLSLDDAQEKIEQWRQEYNRSRPHSSLNNQTPEE
FIQILQKGPDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-55 56
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 5e-40 49
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 9e-47 47
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 5e-42 44
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 1e-24 42