Gene Information

Name : NT01EI_2979 (NT01EI_2979)
Accession : YP_002934368.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : phosphoadenosine phosphosulfate reductase family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3969
EC number : -
Position : 2869864 - 2871072 bp
Length : 1209 bp
Strand : -
Note : -

DNA sequence :
ATGGTTAAAATTAATATTAATGAAAGTGTGCTATTTGCTGCAACGGAGAGAATTGACTGGGCTTTCGACAACTTTTCTCA
TGTTTGTATATCATTTTCAGGGGGGAAGGATTCCACCGTATTACTCCATTTGGCTGGCTACATTGCCAGAAAGAAAAAAA
AGAAATTCAGCGTGTTGTTTATTGACTGGGAAGTGCAGTTTAATTACACAATAAAACATGTTGAGAGTATGCGTGAGTTA
TATAAGGATATTGTAAGCAATTTTTATTGGGTTGCTCTACCGCTCAAAACAGTGAGCGGCGTATCGCGCTTCCAGCCTGA
GTGGCTATGCTGGGATCCCGCTGTTTCGTGGGTTAGAGTCCCCCCCATTTTTGCTATTACTGAGTATGGCTATTTCCCAT
TTTATAAATATGGCATGACATTTGAGGAGTTTGTTCCTGAGTTCTCCGGTTGGTTGGCAGGGCATAATTCTTTAATAACG
TTAATCGGTGTTAGGACCGATGAGTCACTGAGTCGATATATGGGGCTGGTCTCCAGACGGAAGCTAAGGTATGCAGATGA
TAAACCCTGGACAACCGCATCGCTAGATGGATTCTATTATACTGGATATCCTCTATACGATTGGAAAGCAAAAGATATAT
GGATATATCATAAAAAAACGAAATTACCATACAATGAATTATATGATTTGATGTACCAGGCTGGCGTCCCAATGAAATCG
ATGCGGGTATGTGAACCATTTGGCCCTGAGCAGCGTAAAGGTTTATGGCTATATCATGTTTTGGAGCCTGATACCTGGCG
TCTGGTATGCACCAGAGTTGCGGGTGCACATAGTGGTGCGATATATGGTAACCAAAGCGGGGATTTTTATGGGTTAAGAA
AGATGAGTAAACCAAGTGATTTATCCTGGCGAGACTATGCTTTATTCTTACTTGATAACATGCCACCGTCAACGGCTGAA
AACTATCGTTGTAAGATATCCATCTACTTGCAATGGTATCAGGGGCAGGGGTATCCAATAGATATTCCAGATCATCAAGA
TAAAGATCTGGGGGTTAAAGATATTCCCTCCTGGAGACGAATTTGCAAGGTAATAATAAAAAATGATTATTGGTGTAAAA
TGCTATCCTTTAGCCACAGGCCTAATCATTTATATGATAAATACACTAGCGCAACACAAGAGAAAAGGGTAAAGCGGAGG
GTGCTGTGA

Protein sequence :
MVKININESVLFAATERIDWAFDNFSHVCISFSGGKDSTVLLHLAGYIARKKKKKFSVLFIDWEVQFNYTIKHVESMREL
YKDIVSNFYWVALPLKTVSGVSRFQPEWLCWDPAVSWVRVPPIFAITEYGYFPFYKYGMTFEEFVPEFSGWLAGHNSLIT
LIGVRTDESLSRYMGLVSRRKLRYADDKPWTTASLDGFYYTGYPLYDWKAKDIWIYHKKTKLPYNELYDLMYQAGVPMKS
MRVCEPFGPEQRKGLWLYHVLEPDTWRLVCTRVAGAHSGAIYGNQSGDFYGLRKMSKPSDLSWRDYALFLLDNMPPSTAE
NYRCKISIYLQWYQGQGYPIDIPDHQDKDLGVKDIPSWRRICKVIIKNDYWCKMLSFSHRPNHLYDKYTSATQEKRVKRR
VL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 1e-140 65
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 3e-136 64
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 1e-136 64
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 4e-136 64
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-138 64
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 4e-136 64
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-138 64
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-138 64
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 2e-138 64
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 2e-138 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_2979 YP_002934368.1 phosphoadenosine phosphosulfate reductase family protein VFG1504 Protein 5e-141 65