Gene Information

Name : NT01EI_2978 (NT01EI_2978)
Accession : YP_002934367.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG1475
EC number : -
Position : 2869235 - 2869867 bp
Length : 633 bp
Strand : -
Note : conserved hypothetical protein

DNA sequence :
GTGAACGATTTTGATAAAATAATTGTTAGTATAAAAAATTTTTTTTCACAGGAATTTCTGTTTGATGAAAAAGTAGCGGC
GTTAAATTTAATGCGCGAGGCGCTTCATCAGGTGAGCCCGTTTTCGTCTGAACCTATTGATTTTGTGTTATGGGTAAAGG
AGGGGGTGATCGATAAAAATGACTACAATCCAAATAGTATGGCATCCGTAGAAAGGAGAACGTTGGAAACGTCACTAAAT
ATAGAGGGTTTCACACAACCAATAATAACACATAAACAAAATAATAACTACACTATAATTGATGGGTGCAGTCGTTATGA
TATTGCGGAGAAATTAAACCATTCAAACAATCGCTTCAATGGCTATGTCCCTATATCTATAGTGAATCAAGAGAATACTG
ACAGAGCGTCCCGCATCATATCGTCTATCAGACATAATAGAGCCCGAGGTCAACACCAAATAATGTTAATGTCTAATATA
GTGAAGGAGCTTTATTTGCTGGGTTTAGATGATAAAAAAATTAGCGTTGAGCTGGGGATGGATAGGGATGAGGTATTAAG
GCTGAAGCAGATAAATGGAATTGTAGCGCTGTTCGCGGAAGATGCGTTTAGCGAAGCGTGGACGATTAAATAG

Protein sequence :
MNDFDKIIVSIKNFFSQEFLFDEKVAALNLMREALHQVSPFSSEPIDFVLWVKEGVIDKNDYNPNSMASVERRTLETSLN
IEGFTQPIITHKQNNNYTIIDGCSRYDIAEKLNHSNNRFNGYVPISIVNQENTDRASRIISSIRHNRARGQHQIMLMSNI
VKELYLLGLDDKKISVELGMDRDEVLRLKQINGIVALFAEDAFSEAWTIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 6e-48 50
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 4e-48 49
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 5e-47 49
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 5e-47 49
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 2e-46 49
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 2e-46 49
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 4e-47 49
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-33 45
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-33 45
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-33 45
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 2e-24 44
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 9e-20 43
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 6e-20 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_2978 YP_002934367.1 hypothetical protein VFG1505 Protein 2e-47 49