Gene Information

Name : NT01EI_2892 (NT01EI_2892)
Accession : YP_002934288.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Resistance
Product : transcriptional regulatory protein KdpE, putative
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2783350 - 2784087 bp
Length : 738 bp
Strand : +
Note : -

DNA sequence :
GTGACAGCCGTCCCCATCACTATTCTGATCGTCGAAGACGAACAGGCCATCCGCCGCTTTGTGCGTGCCGCCCTGGAAAA
CGAAGGTTGGCGCGTCACGGACGCCGATGGTCTGCAGCGAGGGCTGATCGAAGCCGCAACCCGCCAGCCGGATCTGATCA
TTCTCGATCTGGGGCTACCGGACGGCGACGGTATGGAGTTCATCCGCGATCTGCGCCGCTGGAGCGCCATTCCGGTGATC
GTACTTTCAGCGCGCTGCGATGAGGCCGACAAGGTTGAGACTCTCGACACCGGCGCCGAGGATTTCCTGAGCAAGCCCTT
CGGCGTCGCGGAGCTACTGGCGCGGGTGCGGGTGGCGCTGCGGCGTCATACCCGCCAGCAGCAGGAGATCCCGCAGATCT
GCTTCGCAGACGTACAGGTGGATCTGCTGGCACGCAACGTTACCCGGCACGGTGAGCTGCTGCACCTCACGCCGATCGAG
TTTCGCCTGCTGGCCGAGCTCATCGCCAACAGCGGTAAGGTGCTGACACAACGCCAGCTGCTCAGCAGCGTCTGGGGGGC
CAAACTACGTCGAGCACAGCCACTACCTGCGCATCTATATGGGACACCTGCGCCAAAAGCTGGAGGCGGAACCGGCCCGT
CCACGCCACCTGCTGACCGAAACCGGCGTTGGCTACCGCTTTATGCCCTAGCTCACATCTCCCTGGCGTACACCCGTAAT
AAATATCCTCCGGCATAG

Protein sequence :
MTAVPITILIVEDEQAIRRFVRAALENEGWRVTDADGLQRGLIEAATRQPDLIILDLGLPDGDGMEFIRDLRRWSAIPVI
VLSARCDEADKVETLDTGAEDFLSKPFGVAELLARVRVALRRHTRQQQEIPQICFADVQVDLLARNVTRHGELLHLTPIE
FRLLAELIANSGKVLTQRQLLSSVWGAKLRRAQPLPAHLYGTPAPKAGGGTGPSTPPADRNRRWLPLYALAHISLAYTRN
KYPPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 3e-12 42
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 4e-12 42
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 4e-12 42
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 4e-12 42
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 4e-12 42
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 2e-12 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_2892 YP_002934288.1 transcriptional regulatory protein KdpE, putative BAC0347 Protein 5e-08 42
NT01EI_2892 YP_002934288.1 transcriptional regulatory protein KdpE, putative BAC0308 Protein 2e-11 41