Gene Information

Name : NT01EI_2229 (NT01EI_2229)
Accession : YP_002933638.2
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Unknown
Product : Integrase core domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2143765 - 2144574 bp
Length : 810 bp
Strand : +
Note : -

DNA sequence :
ATGTGCCGAGTGCTCCGTGTCGCCCGTAGTGGCTGGTATGCCTGGCGTCTGCGTCGTCATCAGATAACCCCGCGTCAGCA
GTTCCGGCTCGCTTGTGATGAGGCTGTCCGTAATGCATTCGCTGAGGCAAAACAGCGCTATGGTGCGCCACGCCTTGCTG
ATGAGTTGCCGGAGTACAACATTAAAACCATCGCTGCCAGTCTGCGCCGTCAGGGATTACGGGCGAAAGCGAGCCGTAAA
TTCAGCCCGGTCAGTTACCATGAACATGGCCTGCCGGTGTCGGAAAACCTGTTGAAGCAGGACGTAACAGCCTGTGGGCC
GAATCAGAAATGGTCGGGTGACATTATCTACTTACGTACAGACGAAGGTTGGCTTTACCTAGCAGTGGTGATTGACCTGT
GGTCGCGGGCCGTCATCGGCTGGTCGATGTCTTCGCGGATGACGGCACAACTGGCCTGCGATGCGTTGCAAATGGCGTGG
TGGAGGCGTAAACGCCCGGGAAATGCCATTGTTCATACAGACAGAGGCGGCCAGTACTGTTCGGCGGATTATCAGACTTT
ACTGAAACACCATAACCTGCGTGGCAGTATGAGCGCCAAAGGCTGTTGTTACGACAATGCCTGTGCGGAAAGCTTCTTCC
ACACACTGAAAGTGGAATGTATCCACGGCAAGCACTTTGCCAGTCGGGAAATGATGCGAACGACTGTGCTTAATTATATC
GAGTGCGATTACAATCGCTGGCGTCGCCACAATGCCTGTGGTGGTCTTAGCCCGGAACAATTTGAAAAACAGAACCGAGC
CTGTACATAA

Protein sequence :
MCRVLRVARSGWYAWRLRRHQITPRQQFRLACDEAVRNAFAEAKQRYGAPRLADELPEYNIKTIAASLRRQGLRAKASRK
FSPVSYHEHGLPVSENLLKQDVTACGPNQKWSGDIIYLRTDEGWLYLAVVIDLWSRAVIGWSMSSRMTAQLACDALQMAW
WRRKRPGNAIVHTDRGGQYCSADYQTLLKHHNLRGSMSAKGCCYDNACAESFFHTLKVECIHGKHFASREMMRTTVLNYI
ECDYNRWRRHNACGGLSPEQFEKQNRACT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 1e-107 84
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-101 82
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 4e-100 81
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 5e-101 81
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 8e-43 41
unnamed AAF09030.1 unknown Not tested SHI-O Protein 6e-43 41
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 1e-42 41
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 6e-43 41
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 1e-42 41
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 6e-43 41
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-42 41
unnamed AAF09022.1 unknown Not tested SHI-O Protein 3e-43 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-39 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-39 41
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_2229 YP_002933638.2 Integrase core domain protein VFG1631 Protein 8e-108 84
NT01EI_2229 YP_002933638.2 Integrase core domain protein VFG1706 Protein 4e-43 41