Gene Information

Name : NT01EI_2120 (NT01EI_2120)
Accession : YP_002933531.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein CusR, putative
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2042296 - 2042979 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence :

GTGAAAATACTGATCGTTGAAGATGAGGTAAAAACCGGGAAATATCTGTGTAAGGGATTGACAGAGGCGGGATTTGTCGC
CGATCTCACCGACAATGGTTTAACGGGATACCACCTGGCGATGACCGCCAGCTATGACCTGATCATCCTCGATATTCTGC
TGCCAGACGTCAATGGCTGGGATATCGTGCGCATGCTGCGCAACGCCAATCAGGGGATGCCGATCCTGCTGCTGAGCGCG
CTGGGCACCATCGAGCAGCGGGTAAAGGGGTTGGAACTCGGCGCCGACGATTACCTGGTCAAACCCTTCGCCTTCGCCGA
GCTCTTGGCGCGGGTGAGAACCCTGCTGCGACGCGGCAACACGCACATCCCCGAAAGTCAGTTGCACGTGGCCGATCTCA
GCCTGGATCTCCTCTCCAGAAAGGTGACCCGCAGCGGTAAGCGCATTACGCTGACGGGTAAGGAGTTCACCCTGCTGGAG
TTTTTCATCCGCCATCAGGGGGAAGTTCTGCCCCGCTCCCTGATCGCCTCGCAGGTCTGGGACATGAACTTCGACAGCGA
CACCAACGCCATCGACGTGGCCGTAAAGCGACTGCGGGCGAAGATCGACCTCGACTTCGAGCCTAAGCTGATCCAGACGG
TGCGCGGCGTCGGCTATCTGCTTGAGGCGCCGGATGAGTGTTAA

Protein sequence :

MKILIVEDEVKTGKYLCKGLTEAGFVADLTDNGLTGYHLAMTASYDLIILDILLPDVNGWDIVRMLRNANQGMPILLLSA
LGTIEQRVKGLELGADDYLVKPFAFAELLARVRTLLRRGNTHIPESQLHVADLSLDLLSRKVTRSGKRITLTGKEFTLLE
FFIRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRAKIDLDFEPKLIQTVRGVGYLLEAPDEC

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
copR	NP_460069.2	transcriptional regulatory protein YedW	Not tested	SPI-5	Protein	5e-48	55
copR	AAC33719.1	regulatory protein CopR	Not tested	SPI-5	Protein	2e-47	54

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
NT01EI_2120	YP_002933531.1	transcriptional regulatory protein CusR, putative	BAC0111	Protein	2e-85	87
NT01EI_2120	YP_002933531.1	transcriptional regulatory protein CusR, putative	BAC0347	Protein	8e-79	81
NT01EI_2120	YP_002933531.1	transcriptional regulatory protein CusR, putative	BAC0083	Protein	8e-63	62
NT01EI_2120	YP_002933531.1	transcriptional regulatory protein CusR, putative	BAC0308	Protein	1e-57	60
NT01EI_2120	YP_002933531.1	transcriptional regulatory protein CusR, putative	BAC0197	Protein	1e-58	60
NT01EI_2120	YP_002933531.1	transcriptional regulatory protein CusR, putative	BAC0638	Protein	2e-56	60
NT01EI_2120	YP_002933531.1	transcriptional regulatory protein CusR, putative	BAC0125	Protein	2e-56	54
NT01EI_2120	YP_002933531.1	transcriptional regulatory protein CusR, putative	AE000516.2.gene3505.	Protein	4e-22	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
NT01EI_2120	YP_002933531.1	transcriptional regulatory protein CusR, putative	VFG0596	Protein	2e-48	55
NT01EI_2120	YP_002933531.1	transcriptional regulatory protein CusR, putative	VFG1390	Protein	2e-38	42
NT01EI_2120	YP_002933531.1	transcriptional regulatory protein CusR, putative	VFG1389	Protein	2e-28	41