Gene Information

Name : NT01EI_1906 (NT01EI_1906)
Accession : YP_002933317.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : iron chelate transporter family, permease protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1834662 - 1835663 bp
Length : 1002 bp
Strand : -
Note : iron chelate transporter family, permease protein

DNA sequence : 
ATGATCCGCCGCTCTCCGCGTCTGACGCTGGCGTTGCTGTTGGGTCTATTGATGTTGATCACGCTGACCGCCGCCCACCT
GGGCGCACTGCGCCTGTCGCCCGTCGCGCTGCTGCGCGACGGCGATCCCCTCCAGTGGCAGATCTGGCTCAACATCCGCC
TGCCGCGGGTGCTTCTGGCAGTGGTGATCGGTATTGCGCTGGCCGTCTCCGGCACGATTATGCAGGGGCTGTTCCGCAAC
CCGCTGGCCGATCCCGCCCTGCTGGGGATCAGCAGCGGCGCGGCGCTGTGCGTGGCGCTGACCATCGTGCTCCCGCTGGC
GCTCTCGCCGCTGCTGGCACTGTATACCCAAATGCTGGCGGCGTTTGGCGGTAGCCTGGCCATTTCGCTGCTGATTTATC
TCCTCAGTCGCGGCGCACATGTGACACTGTCACGATTATTGCTCGCCGGCATCGCTATTAACGCCCTCTGTTTTGCCCTG
GTCGGGGTGCTGAGCTACCTGAGCGACGATCAGCAGCTGCGCCAGTTCACCCTGTGGAGCATGGGAACCCTGTCGCGCAG
TGAATGGCATACGCTGGGCGTCAGCGCCCTGCTGATCCTGCCGGCCAGCCTGTTCGCGCTCACGCTGGCCCAGCGCCTGA
ACCTGCTGCAGCTGGGCGATGAGGAGGCCCACTACCTCGGACTTGATGTGGCGCGCACCAAGCGCCAGCTCTTGCTTCTC
AGCGCCGTCCTGGTCGGCAGCGCGGTGGCTGTCAGCGGCGTCATCGGCTTTATCGGCCTGGTGGTTCCCCACCTGTTCCG
CCTGCGGCTCGGCGCCGATCACCGCTGGCTATTGCCCTGCTCGGCCTTGGGCGGTGCCTGCCTGCTGCTGCTGGCCGACA
CCCTGGCCCGCACCCTGGCGGCCCCGGCGGAAATACCGGTCGGGATGCTGACCAGCCTACTGGGCGGCCCCTATTTTCTC
TGGCTGATACTGCGCTACCGGGAGGTAAGTCATGGCCAATAA

Protein sequence : 
MIRRSPRLTLALLLGLLMLITLTAAHLGALRLSPVALLRDGDPLQWQIWLNIRLPRVLLAVVIGIALAVSGTIMQGLFRN
PLADPALLGISSGAALCVALTIVLPLALSPLLALYTQMLAAFGGSLAISLLIYLLSRGAHVTLSRLLLAGIAINALCFAL
VGVLSYLSDDQQLRQFTLWSMGTLSRSEWHTLGVSALLILPASLFALTLAQRLNLLQLGDEEAHYLGLDVARTKRQLLLL
SAVLVGSAVAVSGVIGFIGLVVPHLFRLRLGADHRWLLPCSALGGACLLLLADTLARTLAAPAEIPVGMLTSLLGGPYFL
WLILRYREVSHGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecC AAL08453.1 FecC Virulence SRL Protein 2e-14 42
fecD AAL08452.1 FecD Virulence SRL Protein 2e-13 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_1906 YP_002933317.1 iron chelate transporter family, permease protein BAC0163 Protein 1e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_1906 YP_002933317.1 iron chelate transporter family, permease protein VFG0922 Protein 8e-52 62
NT01EI_1906 YP_002933317.1 iron chelate transporter family, permease protein VFG1044 Protein 1e-14 42
NT01EI_1906 YP_002933317.1 iron chelate transporter family, permease protein VFG1043 Protein 9e-14 41