Gene Information

Name : NT01EI_1699 (NT01EI_1699)
Accession : YP_002933115.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : transcriptional regulator, AraC family
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 1658022 - 1658420 bp
Length : 399 bp
Strand : -
Note : -

DNA sequence : 
ATGACCCAGCAACAACGCAATGCCGCACTGGTCTGCGCCCTGAGCGAATGGATCGAGCGACACCTGGGGCGCGATATCTA
CCTGGATGAGCTGGCCCGTTATTCAGGTTATTCGCTATGGCATATGCAAAAGATCTTCCGGGAAACCACCGGTATGTCGC
TGGGGCGCTATATTCGCCTGCGCAAGCTCACCGGCGCCGCCCGGCGCCTGCGCCACAGCGATGAGGGGATCATTGATATC
GCGCTGTGCTACGGCTTTGCCTCTCAGTCCCACTTTACCTATATGTTTCGTAAACACTTTGGTATGACGCCAACCCGTTA
CCGTCTGCAGGCAGAGCAGCCCACAACGCCAGCGCCGGCGCTACACCACCAGTACGCCGCCGCGGCGCAAAGCGCCTGA

Protein sequence : 
MTQQQRNAALVCALSEWIERHLGRDIYLDELARYSGYSLWHMQKIFRETTGMSLGRYIRLRKLTGAARRLRHSDEGIIDI
ALCYGFASQSHFTYMFRKHFGMTPTRYRLQAEQPTTPAPALHHQYAAAAQSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 4e-16 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_1699 YP_002933115.1 transcriptional regulator, AraC family CP001138.1.gene612.p Protein 1e-19 46
NT01EI_1699 YP_002933115.1 transcriptional regulator, AraC family CP000647.1.gene4499. Protein 2e-16 42
NT01EI_1699 YP_002933115.1 transcriptional regulator, AraC family CP001138.1.gene4488. Protein 1e-16 42
NT01EI_1699 YP_002933115.1 transcriptional regulator, AraC family CP001918.1.gene327.p Protein 1e-16 41
NT01EI_1699 YP_002933115.1 transcriptional regulator, AraC family BAC0371 Protein 3e-16 41
NT01EI_1699 YP_002933115.1 transcriptional regulator, AraC family NC_002695.1.914293.p Protein 3e-16 41
NT01EI_1699 YP_002933115.1 transcriptional regulator, AraC family CP000034.1.gene4505. Protein 5e-16 41
NT01EI_1699 YP_002933115.1 transcriptional regulator, AraC family CP000647.1.gene1624. Protein 7e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_1699 YP_002933115.1 transcriptional regulator, AraC family VFG0585 Protein 1e-16 42