|
Name : HDEF_p0007 (HDEF_p0007) Accession : YP_002925033.1 Strain : Genome accession: NC_012752 Putative virulence/resistance : Virulence Product : putative resolvase HDEF_p0007 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 6732 - 7292 bp Length : 561 bp Strand : + Note : COG1961 DNA sequence : ATGACGGGACAACGTATTGGCTATATTCGGGTCAGTACTTTTGACCAAAATTCAGAGCGGCAGCTCGAAGGCATCACAGT CGATCGCATTTTTACCGACAAAGCCTCGGGCAAGGATATCAAACGACCGGAACTGGAGGCATTGCTGAGTTTCGTCCGTA GTGGCGATACCGTGTTGGTGCATAGCATGGATCGTCTGGCCCGTAATCTTGATGATTTACACCGCCTCGTTCAACTGTTG ACGCAACGCGGCGTCCGCATTGAGTTCTGCAAGGAACATCTGAGCTTTACCGGCGAAGACTCACCCATGGCCAATCTGAT GTTATCTGTCATGGGCGCATTTGCTGAATTTGAGCGCTCCCTGATCAAAGAACGCCAGCGCGAAGGCATCGCATTAGCCA AACAGCGGGGCGCTTATCGTGGCCGCAAAAAATCACTCTCGGAGAGTGAAATGACCGAACTATATCGCCGCGTTGTTGCC GGCGACAAAAAAGCCCAGGTAGCACGCGACTTGGGTATCAGTCGGGAAACATTATATCAATATTTGAAGAGAGGAGAGTA G Protein sequence : MTGQRIGYIRVSTFDQNSERQLEGITVDRIFTDKASGKDIKRPELEALLSFVRSGDTVLVHSMDRLARNLDDLHRLVQLL TQRGVRIEFCKEHLSFTGEDSPMANLMLSVMGAFAEFERSLIKERQREGIALAKQRGAYRGRKKSLSESEMTELYRRVVA GDKKAQVARDLGISRETLYQYLKRGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpR | YP_006098373.1 | transposon Tn21 resolvase | Not tested | Tn2411 | Protein | 1e-69 | 81 |
| tnpR | AAL08439.1 | resolvase TnpR | Not tested | SRL | Protein | 8e-70 | 81 |
| tnpR | AFV53121.1 | Tn21 resolvase | Not tested | AbGRI2-1 | Protein | 8e-70 | 81 |
| tnpR | ACF06154.1 | resolvase | Not tested | Tn5036-like | Protein | 6e-67 | 80 |
| tnpR | ACY75537.1 | TnpR | Not tested | Tn6060 | Protein | 2e-66 | 76 |
| res | YP_005124341.1 | DNA-invertase | Not tested | Not named | Protein | 2e-27 | 49 |
| res | AGK06929.1 | resolvase | Not tested | SGI1 | Protein | 9e-21 | 41 |
| res | AGK06966.1 | resolvase | Not tested | SGI1 | Protein | 9e-21 | 41 |
| res | AGK07012.1 | resolvase | Not tested | SGI1 | Protein | 9e-21 | 41 |
| res | AGK07070.1 | resolvase | Not tested | SGI1 | Protein | 9e-21 | 41 |
| res | AAK02044.1 | resolvase | Not tested | SGI1 | Protein | 9e-21 | 41 |
| tnpR | ACD85600.1 | TnpR resolvase | Not tested | SGI2 | Protein | 9e-21 | 41 |
| res | AGF34985.1 | resolvase | Not tested | SGI1 | Protein | 9e-21 | 41 |
| res | AGF35025.1 | resolvase | Not tested | SGI1 | Protein | 9e-21 | 41 |
| res | AGF35059.1 | resolvase | Not tested | SGI1 | Protein | 9e-21 | 41 |
| resX | ADZ05759.1 | invertase/resolvase | Not tested | AbaR10 | Protein | 1e-14 | 41 |
| resX | ADZ05753.1 | invertase/resolvase | Not tested | AbaR10 | Protein | 3e-16 | 41 |
| resX | ADZ05809.1 | invertase/resolvase | Not tested | AbaR20 | Protein | 3e-16 | 41 |
| resX | AGK36651.1 | partial invertase/resolvase | Not tested | AbaR26 | Protein | 3e-16 | 41 |
| ACICU_00231 | YP_001844890.1 | site-specific recombinase, DNA invertase Pin protein | Not tested | AbaR20 | Protein | 5e-16 | 41 |
| resX | ACN81037.1 | partial invertase/resolvase | Not tested | AbaR5 | Protein | 5e-16 | 41 |
| 1_365 | CAJ77091.1 | Resolvase N-term | Not tested | AbaR1 | Protein | 3e-16 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HDEF_p0007 | YP_002925033.1 | putative resolvase HDEF_p0007 | VFG1030 | Protein | 3e-70 | 81 |
