Gene Information

Name : HDEF_p0015 (HDEF_p0015)
Accession : YP_002925040.1
Strain :
Genome accession: NC_012752
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : S : Function unknown
COG ID : COG5464
EC number : -
Position : 15584 - 16510 bp
Length : 927 bp
Strand : -
Note : COG5464

DNA sequence :
ATGAAAATTTCTACACCGCACGATCGTTTGTTCAAAAAATTTTTCGGGGATATCGCCCTCGCACGCAATTTTTTTGAAAT
CCATCTACCCTCTTCTATTTTAAAAATCGTTTCTTTTCCTTCGTTAAAAATGGTGCCGGGATCTTTTATTGATAAAAGTT
TAAAGCAATCTCATTCCGATATGGTCTATTCGTTTGAAACCAGCACGGGAAAGGAGGGATATTTGTACTGTGTAGTCGAG
CATCAAAGCACCGACGATAAAATGATGGCTTTTAGAATGAAAAAATACAGCTTGGCGGTGATGCAGCAACACCTTGACCA
AGGTCACGACACCTTACCTTTGGTCTTGCCTGTCCTGTTCTATCACGGGCAGAAGAGTCCTTACCCGCATAGCATGGATT
GGCGGGATTGCTTTTGCGAAAAAGAACTCGCGAGGATATTAGACTCACAACCTTTTCCATTGGTAGATGTTACCATGCTT
CCTGAAGAAGAAATTATGAAGCACGGGATCATTTCCTGGCTTGAAATGAGTCAAAAAATGGTTCATACCCGTGACATGAT
GGAAATAGCGCCTTATCTTATTCGTCTAGATAAGCTTTTTCCGTTAAACGATGAACTCTTTAAAAGTTTGTTGTATTATT
TGTTTCAAGAAGGAGAAACGGCAGATCGTATGTTGTTTTTTGACGCTCTTTCTTCAACCACTCAACGGGAGAATGTGATG
ACGATAGCAGAAGAACTCAAAAGAGAAGGCAGAGAAGAAGGTAGAGAAGAAGGTAGAGAAGAAGGTAGAGAAGAAGGTAG
AGAAGAAGGTAGAGAAGAGGGTAGAGAAGAAATTGCTAAAAATCTCTTAAATAATGGCTTTTCTTTCAAACAGGTTAAAA
TGTATACCGGTCTTTCTGAAGACAGTTTAAACAAATTACTTGATTAG

Protein sequence :
MKISTPHDRLFKKFFGDIALARNFFEIHLPSSILKIVSFPSLKMVPGSFIDKSLKQSHSDMVYSFETSTGKEGYLYCVVE
HQSTDDKMMAFRMKKYSLAVMQQHLDQGHDTLPLVLPVLFYHGQKSPYPHSMDWRDCFCEKELARILDSQPFPLVDVTML
PEEEIMKHGIISWLEMSQKMVHTRDMMEIAPYLIRLDKLFPLNDELFKSLLYYLFQEGETADRMLFFDALSSTTQRENVM
TIAEELKREGREEGREEGREEGREEGREEGREEGREEIAKNLLNNGFSFKQVKMYTGLSEDSLNKLLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp AAN64216.1 transposase Not tested necrotizing factor locus Protein 4e-55 47
YpsIP31758_3726 YP_001402680.1 transposase Not tested YAPI Protein 2e-50 45
YE3497 YP_001007658.1 putative transposase Not tested YAPI Protein 8e-49 44
pilW CAF28495.1 putative transposase Not tested YAPI Protein 4e-49 44