Gene Information

Name : lspA (HDEF_0832)
Accession : YP_002923701.1
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Unknown
Product : prolipoprotein signal peptidase (SPase II)
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : -
Position : 827213 - 827731 bp
Length : 519 bp
Strand : +
Note : COG0597

DNA sequence :
ATGAACAAAATAAACCGTTCGATGGGTATGACTCAATTGCGTTGGTTGTGGCTTTCTGTCGTGGTCATGGTGTTAGATCT
CGCCAGCAAATATTGGATCATTCATCATTTTGATTTATATGAAACACGGCCTTTGATTCCTTTTTTGAACATGACTTATG
CTCAAAATACAGGGGCCGCATTTAGTTTTTTGGCAGACAGCGGCGGTTGGCAACGTTGGTTTTTTATTCTGGTCGCTGTT
TTGATTATCGCTATCCTGATGAGATTAATGTATCGCTCAACAGAAAATAAATGGATAAACGCCGCTTATGCTCTCATCAT
TGGGGGTGCCCTTGGAAATTTATGTGATCGAATAGCGAATGGCTTTGTGATCGATTTTATTGATTTTTATGTCAACCAAT
GGCATTGGCCTACCTTTAATTTGGCTGATTCTGCTATTTGTATCGGTGCTTTATTCATATTTTTAGAAGGATTTTTAAAT
CCGGCTTCAAAAAAACAGATCACTCAAAAAGAGAAATAA

Protein sequence :
MNKINRSMGMTQLRWLWLSVVVMVLDLASKYWIIHHFDLYETRPLIPFLNMTYAQNTGAAFSFLADSGGWQRWFFILVAV
LIIAILMRLMYRSTENKWINAAYALIIGGALGNLCDRIANGFVIDFIDFYVNQWHWPTFNLADSAICIGALFIFLEGFLN
PASKKQITQKEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-09 41
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 8e-10 41
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 8e-10 41
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 8e-10 41
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 1e-09 41