Gene Information

Name : hemC (HDEF_0703)
Accession : YP_002923584.1
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Unknown
Product : hydroxymethylbilane synthase (porphobilinogen deaminase)
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 692230 - 693159 bp
Length : 930 bp
Strand : +
Note : COG0181

DNA sequence :
ATGTCAAACAACATGATTCGTCTTGCTACAAGACAAAGCCCCCTGGCACTTTGGCAGGCGCACTATGTGAAAACAGGTTT
AGAATTTTTTCACCCTGATTTGAAGGTGATATTACTACCTATGGTCACTCAAGGCGATAATATACTCGGCACAGCTTTAT
CAAAAACAGGAGGAAAAGGGCTTTTTGTAAAAGAATTAGAACGGGCTGTTTTAGACAATCGTGCGGATATTGCCGTGCAT
TCTATAAAAGATATGCCTCTTTATTTCCCAGAGGGATTGGGATTAGTCGCAGTTTGTGAGCGAGAGGATCCCAGAGATGC
GTTTCTTTCTTTGCGATATCATGATGTGGCTCAATTGCCTGAAGGCAGCGTAGTGGGAACGTCCAGCTTAAGGAGGCAAT
GCCAATTATACAAAAATTATCCCGGTATCGTTGTTCGAGATTTACGAGGTAATGTAGGGGCTCGTTTGAAAAAACTGGAT
CAAGGAGATTACGATGCCATTGTGTTAGCAGTCGCGGGTTTAAAACGTCTCGGGTTGGAAAATCGCATGACTCAGATTCT
CAGGCCAGAAACATCATTGCCGGCAGCAGGTCAAGGTGCAATAGGGATTGAATGCCGATTAGACGATACTGTCACACTTC
AACGAGTGGCGACTTTAAATCATCGACCGTCTCAATTGAAGATCTCTTGTGAACGAGCCCTACTAAAGCGTCTTGAAGGG
GGCTGCCAGACCCCTATTGGTAGCTATGCTGAAATAGAAAATGACGAGTTATGGCTCAGGGCTTTTGTTGGTGCTCCTGA
TGGCCAGCTGATCATTGATGGTGAAAGACGAGGGAATTTTGATTCAGCGGAAAAGATCGGGTTTGAATTAGCGAATGAGT
TGTTATCTCGAGGAGCAGAAGCAATTTTGGCACAACTGAATCGACAATAG

Protein sequence :
MSNNMIRLATRQSPLALWQAHYVKTGLEFFHPDLKVILLPMVTQGDNILGTALSKTGGKGLFVKELERAVLDNRADIAVH
SIKDMPLYFPEGLGLVAVCEREDPRDAFLSLRYHDVAQLPEGSVVGTSSLRRQCQLYKNYPGIVVRDLRGNVGARLKKLD
QGDYDAIVLAVAGLKRLGLENRMTQILRPETSLPAAGQGAIGIECRLDDTVTLQRVATLNHRPSQLKISCERALLKRLEG
GCQTPIGSYAEIENDELWLRAFVGAPDGQLIIDGERRGNFDSAEKIGFELANELLSRGAEAILAQLNRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-70 53
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-70 53