|
Name : dnaB (HDEF_0678) Accession : YP_002923564.1 Strain : Candidatus Hamiltonella defensa T5A Genome accession: NC_012751 Putative virulence/resistance : Unknown Product : replicative DNA helicase; chromosome replication; chain elongation Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 672695 - 674098 bp Length : 1404 bp Strand : + Note : COG0305 DNA sequence : ATGGCCACTAAAAAATCACAGACAACAATGCTAAAAGATCAGCAGATAGAAATGCTAAAATTGCCCCCCCATTCTATAGA AGCCGAGCAGTCTGTGCTCGGGGGTCTGATGTTAGATAACGAACGTTGGGATAACGTTTCTGAACGTGTAGGCAACATCG ATTTTTTTAGTTTGCCTCATCGCAGGATCTTTATGGCCATGCAACGTCTCGTTCAAAAAAATGCGCCGATTGATTTGGTG ACTTTGTCTGATGCTTTAGAGCAAAAGGGAGATTTAGAAAAAGTAGGAGGATTCGCCTATTTAGCCGAATTGGCTAAAAA TATCCCTAGTACCGCTAATATTTCTGCTTATGCCGATATTGTGAGAGAGAGAGCCATCGTCCGTGAAATGCTTTCAGTGA CACATGAAATTGCGGATGCCTGCTATGAACCTCAAGGCCTCAGCAGTACAGATTTGCTCGATTTTGCGGAATCCAGGGTA TTTAAAATTGCTGAGAACCGACAAAGGCAAAATGACGGGCCCAAGACGATTGATGATGTGTTAACAGAGACAGTCAATCG TATTGAACACCTTGTTCGTCATCCACATGATGGTGTGACCGGTGTGTCAACAGGATATCGGGATCTTGATGAAAAAACGT TAGGCTTGCAAAAATCCGATCTTATTATTGTGGCGGCTCGCCCTTCTATGGGAAAAACCACATTTGCCATGAATATCTGT GAAAATGCACTCATGACACAAGAAAAACCTGTTTTGATTTTTAGTTTAGAAATGCCTGCTCATCAGTTGATGATACGTAT GCTCTCATCCTTTTCTCGTATTGATCAGACCCGTATGCGTACCGGTAAACTAGCAGACGGTGATTGGGCTCGTATCAGCA GTGCGATGGGAATGCTATTAGAAAAAGGGAATATGTATATTGATGATTCTTCTGCTTTGAGCCCTACAGAGATTCGTTCT CGTGCTCGGCGAATTTTTCGTGAAAACGATGGCTTAAGCCTCATTATGATTGATTATCTTCAATTAATGCGTGTCCCGGC TTTAGCGGAGAATCGAACATTAGAAATTTCAGAAATATCCCGCTCACTAAAAGCATTGGCAAAAGAATTACAGGTTCCGG TCATGGCGTTATCTCAGCTCAATAGAGGGTTAGAACAACGAGCGGAAAAACGGCCTGTCAATTCTGATTTGAGAGAATCA GGCTCGATCGAGCAAGATGCGGATTTAATTATGTTTATTTATCGTGATGAGGTTTATAACGAAAATAGCGAAATGAAAGG GATTGCTGAGATTATTTTAGGTAAACACAGAAATGGCCCGACAGGCTCTATACGTTTGACATTTAGTGGTCAGTTCTCTC GATTTGATAATTATGCGGGCACTCAATATGATGATTATCATTGA Protein sequence : MATKKSQTTMLKDQQIEMLKLPPHSIEAEQSVLGGLMLDNERWDNVSERVGNIDFFSLPHRRIFMAMQRLVQKNAPIDLV TLSDALEQKGDLEKVGGFAYLAELAKNIPSTANISAYADIVRERAIVREMLSVTHEIADACYEPQGLSSTDLLDFAESRV FKIAENRQRQNDGPKTIDDVLTETVNRIEHLVRHPHDGVTGVSTGYRDLDEKTLGLQKSDLIIVAARPSMGKTTFAMNIC ENALMTQEKPVLIFSLEMPAHQLMIRMLSSFSRIDQTRMRTGKLADGDWARISSAMGMLLEKGNMYIDDSSALSPTEIRS RARRIFRENDGLSLIMIDYLQLMRVPALAENRTLEISEISRSLKALAKELQVPVMALSQLNRGLEQRAEKRPVNSDLRES GSIEQDADLIMFIYRDEVYNENSEMKGIAEIILGKHRNGPTGSIRLTFSGQFSRFDNYAGTQYDDYH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-97 | 52 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-100 | 51 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 8e-101 | 51 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 7e-101 | 51 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-99 | 49 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-91 | 48 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-91 | 48 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-81 | 46 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 6e-77 | 45 |
