Gene Information

Name : HDEF_0581 (HDEF_0581)
Accession : YP_002923471.1
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : S : Function unknown
COG ID : COG5464
EC number : -
Position : 567221 - 567961 bp
Length : 741 bp
Strand : -
Note : N terminal truncation; COG5464

DNA sequence :
ATGCGGGGTAACTCGCACGTACGGTTCTTGAGGGAGTGGGCACTTGCGGCCTGCTTACCTAATCAGAGCAGACCAGAAAA
GCTAATGGCCTTTCGTTTGATGCGTTATGCGGTGGCCGCCATGCAGCGCCATTTAGAGCAAGGTAACGACACATTGCCGG
TAGTCATCCCCCTCCTGTTTTACCATGGCACAACGTCGCACTATCCTTATAGCACTAAATGGTTAGACTGTTTCTGTGAG
CCAGAATTGGCAGCTACGGTATATCAGCAAGCATTCCCGCTGGTTGATATTACCACGATACCGGATGAGGAGATCCTGAC
ACACCGCCGAGTAGCACTCCTGCAACTGGTACAAAAGCACATCCGAACGCGAGATATGTTGGAACTTGCCGTAGAATTAG
CTAATCTAATAGAAAGATGGCAGTATTCTAAAGAACAATGCAAGAGTTTATTATATTATATAGCTCAGGTAGGAAATACG
ATTGACGGCGAGGGATTTATCCGAACCCTTGCGGAAAAGGCACCGACTTACCGGGAGGATTTTATGACGATTGCAGAACA
GTTAGAAGCTAAGGGTGAAGCCAGAGGTGAGGCTAGAGGCTATCAGCTAGGCCGACAGGATGGCGTTAAAGAAGCTACTC
GCCAACTGGCAAGACAGCTTCTATCTGATGGTGTAGCACGAGAAAATATTAAACGCTATACCTATCTTTCAGATAGTGAA
CTAGATAAACTATTAGCTTAA

Protein sequence :
MRGNSHVRFLREWALAACLPNQSRPEKLMAFRLMRYAVAAMQRHLEQGNDTLPVVIPLLFYHGTTSHYPYSTKWLDCFCE
PELAATVYQQAFPLVDITTIPDEEILTHRRVALLQLVQKHIRTRDMLELAVELANLIERWQYSKEQCKSLLYYIAQVGNT
IDGEGFIRTLAEKAPTYREDFMTIAEQLEAKGEARGEARGYQLGRQDGVKEATRQLARQLLSDGVARENIKRYTYLSDSE
LDKLLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp AAN64216.1 transposase Not tested necrotizing factor locus Protein 3e-52 50
YpsIP31758_3726 YP_001402680.1 transposase Not tested YAPI Protein 2e-50 48
YE3497 YP_001007658.1 putative transposase Not tested YAPI Protein 5e-51 47
pilW CAF28495.1 putative transposase Not tested YAPI Protein 1e-50 47
PMI2627 YP_002152329.1 transposase Not tested Not named Protein 5e-42 42