Gene Information

Name : ugd (HDEF_0538)
Accession : YP_002923439.1
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 534870 - 536036 bp
Length : 1167 bp
Strand : -
Note : COG1004

DNA sequence : 
ATGAAAATTGCGGTCGTTGGCACAGGTTATGTTGGACTCTCTAATGCTATTTTATTGTCTCAACATAATGAAGTGGTAAC
GCTTGATCTCGTGCCAGAAAAGGTTGATTTGATTAATGCAAAACAATCACCCATCGCGGATGGGGATATTGAACACTTTC
TGAAACATAAAACGCTCAATTTAAGGGCCACTTTGAATAAAGAAGAGGCTTACAAAGCGGCCGATTTTGTCATAATAGCC
ACCCCGACTGATTATGATGCAAAGACCTACTGCTTTAACACTGAGTCGGTGGAAGAGGTCATTGATGATGTGAGTCGTTG
TTATCCTAAGGCAGTGATGGTGATTAAATCCACCGTTCCTGTTGGTTTCACATCTAAAATAAAAGCGCAATTTGCCTGCG
ATAATATTATTTTTTGTCCTGAATTTTTGCGTGAGGGAAAGGCCCTACATGATAATCTATACCCTTCACGGGTTATAGTG
GGCGAGCGTTCTCGACGAGCTGAAATTTTTGCAAATTTACTCAAACAAGGGGCTGTCAAGAAAGACATTGAGACTCTCTT
TACCGATGCCACTGAAGCTGAAGCGATTAAACTTTTTGCCAATACCTATTTGGCGATGAGGGTGGCGTATTTTAATGAGT
TGGACACCTATGCGGCCAGCCATAGGCTAAATACGAGACAAATTATTGAAGGGGTGAGTTTAGATCCCCGTATTGGGCAT
CATTATAATAATCCCTCATTTGGTTATGGCGGATATTGCCTCCCTAAAGACACTAAACAGTTGCTAGCGAATTACCAGGA
CGTGCCTCAGCATTTAATTCAGGCCATCGTTGACTCGAATCGTACTCGTAAAGATTTTATTGCGGATGCCATTCTTCAAA
AAAAGCCTAAAGTAGTGGGGATTTATCGTTTGATTATGAAAAGTGGCTCAGATAATTTCCGCACTTCTTCTGTTCAAGGG
ATTATGAAGCGCATTCATGCGAAAGGTATTGAGATCGTCGTTTATGAGCCAGTTTTAAAAGAAAAGACGTTTTTTGGGTG
CCAAGTAATAGAGGACCTGGTCAGGTTTAAAAATAAATCAGATGTAATTATTGCAAATCGCCCTACATATCATTTGAACG
ATGTATCAAAAAAAGTGTTTACTCGTGATCTATTTGGGCACGATTAA

Protein sequence : 
MKIAVVGTGYVGLSNAILLSQHNEVVTLDLVPEKVDLINAKQSPIADGDIEHFLKHKTLNLRATLNKEEAYKAADFVIIA
TPTDYDAKTYCFNTESVEEVIDDVSRCYPKAVMVIKSTVPVGFTSKIKAQFACDNIIFCPEFLREGKALHDNLYPSRVIV
GERSRRAEIFANLLKQGAVKKDIETLFTDATEAEAIKLFANTYLAMRVAYFNELDTYAASHRLNTRQIIEGVSLDPRIGH
HYNNPSFGYGGYCLPKDTKQLLANYQDVPQHLIQAIVDSNRTRKDFIADAILQKKPKVVGIYRLIMKSGSDNFRTSSVQG
IMKRIHAKGIEIVVYEPVLKEKTFFGCQVIEDLVRFKNKSDVIIANRPTYHLNDVSKKVFTRDLFGHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 4e-88 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ugd YP_002923439.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 2e-97 53