Gene Information

Name : gspG (HDEF_0349)
Accession : YP_002923257.1
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Virulence
Product : protein exporter, transport across outer membrane (General Secretory Pathway)
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 355877 - 356326 bp
Length : 450 bp
Strand : -
Note : COG2165

DNA sequence :
ATGTCATTAAATCACACAACAGCTCGTGGATTTACCCTGTTAGAAATCATGGTGGTCATTGTCATTCTTGGTGTTTTAGC
CAGTCTGGTGATTCCTAATTTAATGGGCAATAAAGAAAAAGCGGATCAACAAAAGGTGATCAGCGATATTGTGGCGTTAG
AAACCAGCCTGGATATGTATAAGCTCGATAACGATCTGTATCCCACCACCGAGCAGGGATTGCAATCCCTAATCAGTAAG
CCGATGCGCTCTCCAGAACCGCTTCACTACCGAAAACAGGGTTACATTAAACGTTTACCCAAGGATCCCTGGGGTCATCC
GTATCAATACATCCACCCTGGGGAAAAAGGCGTTATGGATATTTATTCACTCGGCATGGACGGAGAAGAAGGCGGTGAAG
GCAATGCGGCGGACATCGGGAACTGGAATTTACACGAGTATCAAAAATAA

Protein sequence :
MSLNHTTARGFTLLEIMVVIVILGVLASLVIPNLMGNKEKADQQKVISDIVALETSLDMYKLDNDLYPTTEQGLQSLISK
PMRSPEPLHYRKQGYIKRLPKDPWGHPYQYIHPGEKGVMDIYSLGMDGEEGGEGNAADIGNWNLHEYQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-45 69
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-45 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_002923257.1 protein exporter, transport across outer membrane (General Secretory Pathway) VFG2050 Protein 5e-46 69
gspG YP_002923257.1 protein exporter, transport across outer membrane (General Secretory Pathway) VFG0180 Protein 3e-35 55
gspG YP_002923257.1 protein exporter, transport across outer membrane (General Secretory Pathway) VFG1871 Protein 1e-30 49