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Name : kdsB (HDEF_0235) Accession : YP_002923151.1 Strain : Candidatus Hamiltonella defensa T5A Genome accession: NC_012751 Putative virulence/resistance : Virulence Product : CTP:CMP-3-deoxy-D-manno-octulosonate transferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 243568 - 244314 bp Length : 747 bp Strand : + Note : COG1212 DNA sequence : ATGTCTTTTGTGATTGTTATTCCTGCGCGCTATGGATCAACTCGTTTGCCTGGGAAACCTTTAATTGATATTCAGGGTAA ACCCATGGTGCTCCATGTGATGGAGCGAGCAAGAGAGGCAGGAGCTGATCGTGTGATTGTGGCGACTGATCATATAGAAA TTTTACAAGTCATTAAATCAGCAGGTGGGGAAGCTTGCTTCACAAGCTCTGAGCATTCATCAGGAACAGAACGTTTAGCT GAAGTCATTGAAAAATATAGATTCAGTGATACTGATATTATCGTTAATGTACAGGGCGATGAGCCTATGATTCCCCCTAT TATTATTGATCAGGTTGCAAAAAACCTTGCCAACACCTGCTTGGGTATGGCCACTTTGGCTGCGCCTATTACGAATAAAG TAGATTTAATGAATCCTAATGTTGTGAAAGTAGTGGTGAATGCCTTGGGTCATGCTTTATATTTTTCTCGAGCACCCATT CCATGGAAACGTGATGGGCTTATGACTGAGGAAAAAAACAGGACGGCGTTGCGCCATATTGGTATATATGCTTATCGAGT TGATTTTGTTCGCCGTTATATTAATTGGGGGAAAAGTCCATTAGAGGAAATAGAGAAATTGGAGCAATTACGTGTTTTAT GGCATGGTGAAAAGATCCACGTCGATATAGTCAAAAAGATTCCCCCTCAAGGTATAGACAGCCCAGAAGATTTAGAAAAA ATTCGAAAAATTCTTCCTGATTATTAA Protein sequence : MSFVIVIPARYGSTRLPGKPLIDIQGKPMVLHVMERAREAGADRVIVATDHIEILQVIKSAGGEACFTSSEHSSGTERLA EVIEKYRFSDTDIIVNVQGDEPMIPPIIIDQVAKNLANTCLGMATLAAPITNKVDLMNPNVVKVVVNALGHALYFSRAPI PWKRDGLMTEEKNRTALRHIGIYAYRVDFVRRYINWGKSPLEEIEKLEQLRVLWHGEKIHVDIVKKIPPQGIDSPEDLEK IRKILPDY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 5e-39 | 46 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 4e-39 | 46 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 3e-39 | 45 |
