Gene Information

Name : HDEF_2205 (HDEF_2205)
Accession : YP_002924899.1
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Unknown
Product : phage baseplate J-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 1998519 - 1999400 bp
Length : 882 bp
Strand : -
Note : COG3948

DNA sequence : 
ATGACCAACGCGATTCATCTGGCGATATTGCCCGACCCTGATGTGGTCCAACCCCTGGATTATGACAGTATTTTGTCTGA
AATGCTGGCTGACTTGCGTCATCGGGCACCTGAGTTGACCGCCCTGGTGGCATCCGATCCCGCTTACAAAATTCTGGAAG
TCGCGGCTTATCGTGAATTATTATTGCGTCAACGGGTCAACGATGCGGGCCGTTCAGTGATGCTGGCCTATGCCAAAGGC
AAGGACCTGGATCATCTTGCAGCACTTTTCGGTGTTTCTCGTTTGGTCATTGACCCCGGCAACCCTGATGCCATTCCCGC
TTTCCCTGCCACTTATGAAGACGATGAAAGGCTCCGCCAAAGAATACCGTTATCATTGGAAGGTTACAGCACAGCGGGGC
CCATAGGTGCCTATGTCTATCACACCCTGGCCGCCTCGGGTGACGTCAAGGATGTCTCGGTGACCAGCCCGTCGCCGGGT
GAAGTGCGGGTCACCGTGTTGAGTATGGACGAAAAAGGGGTCCCTGATGCCGCGTTGCTTCAAGCCGTCACAGAGCGGCT
CAACCACGAAGCGATACGGCCATTAACGGACCATATCACCGTACAGGCGGCGGACATCATTGAATACCACATCAGCGCCC
ATCTGACCTTTTATCCTGGCCCGGATCGATCTGTTGTCGCGGAACAATCCAGAATCAAGGTGACGGAGTATGCCACTCAA
CAGCATCAACTGGGCTTTGATGTCACCTTGTCCGGGTTGTATGCCGCCCTGCACCAGCCCGGTGTGCAAAACGTGCGGAT
GACCTCTCCTGCTGAAGATATTTTGGTTCGAGCGCATCAGGCGGCCTTTGCGACCGCTATCCACGTTTCTGAAGGGGGCT
GA

Protein sequence : 
MTNAIHLAILPDPDVVQPLDYDSILSEMLADLRHRAPELTALVASDPAYKILEVAAYRELLLRQRVNDAGRSVMLAYAKG
KDLDHLAALFGVSRLVIDPGNPDAIPAFPATYEDDERLRQRIPLSLEGYSTAGPIGAYVYHTLAASGDVKDVSVTSPSPG
EVRVTVLSMDEKGVPDAALLQAVTERLNHEAIRPLTDHITVQAADIIEYHISAHLTFYPGPDRSVVAEQSRIKVTEYATQ
QHQLGFDVTLSGLYAALHQPGVQNVRMTSPAEDILVRAHQAAFATAIHVSEGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 2e-53 43
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 2e-53 43
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 3e-42 42