Gene Information

Name : yfeB (HDEF_2125)
Accession : YP_002924836.1
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1945795 - 1946685 bp
Length : 891 bp
Strand : -
Note : COG1121

DNA sequence : 
ATGAAAAGTGACATGTTTATCCGCCCTGAGCTTTTAGTAGAAAACGTTTCTGTCACTTATAAAAATGGTCATACCGCGAT
TTATGATGCGAGTTTTGCTTTATCAGGCGGTGTAATCTGTGCGCTAGTGGGCGTCAATGGCAGCGGTAAATCGACTTTAT
TTAACAGCATTATCGGGCTTATTAAACCAACATCAGGTCATGTGAGCTTGAATCATCAACCCATCAGTTATGCTTTGCGT
AAAAACAGCATTGCTTATGTACCACAAACAGAAGAGATTGATTGGAATTTCCCTGTCCTGGTCAAAGATGTTGTCATGAT
GGGGCGCTATGGAAAAATGAATTTTTTTCGGATCCCCAGCCAAAAAGATAAAAATATTGTGAATCAGGCCATAGAGCGTA
TGGGCCTATCTGAATTAGCAACACGGCAAATTGGGGAGCTGTCTGGTGGACAAAAAAAACGGGTATTTTTAGCACGTTCA
CTGGCACAAGAAGCGTCTGTCTTGCTACTTGACGAGCCTTTCACTGGTGTCGATGTTAAAACAGAAAACGCCATTATTGA
TTTGTTGCGTATTTTACGGGATACAAATCACTTAATTTTGGTATCAACCCATAATTTGGGGAGCGTGCCAGAATTTTGTG
ATCACGTTATTTTTATTAACCGAACAATTTTGTGTGCTGGTAGGACAGAAACGACTTTTACACAAAAAAATCTGGAAATG
ACTTTTGGCGGTGTACTTCGGCATATTAATCTCTCTGGTTCGGCACTGCATGAGGATAATGATGGCCGCAGCGTGACGGT
GATTACTGATGATGAACGCCCTGTAGTGTTTTATGGCCATACTAAAAATGATCCTCCAACTCAAACTAAATCCAAGGGGA
CATCTTCTTAA

Protein sequence : 
MKSDMFIRPELLVENVSVTYKNGHTAIYDASFALSGGVICALVGVNGSGKSTLFNSIIGLIKPTSGHVSLNHQPISYALR
KNSIAYVPQTEEIDWNFPVLVKDVVMMGRYGKMNFFRIPSQKDKNIVNQAIERMGLSELATRQIGELSGGQKKRVFLARS
LAQEASVLLLDEPFTGVDVKTENAIIDLLRILRDTNHLILVSTHNLGSVPEFCDHVIFINRTILCAGRTETTFTQKNLEM
TFGGVLRHINLSGSALHEDNDGRSVTVITDDERPVVFYGHTKNDPPTQTKSKGTSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-74 60
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 5e-75 60
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 5e-75 60
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 8e-75 60
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-74 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeB YP_002924836.1 iron ABC transporter ATP-binding protein BAC0440 Protein 2e-118 78
yfeB YP_002924836.1 iron ABC transporter ATP-binding protein BAC0350 Protein 5e-75 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeB YP_002924836.1 iron ABC transporter ATP-binding protein VFG0526 Protein 4e-75 60