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Name : kdsD (HDEF_1948) Accession : YP_002924684.1 Strain : Candidatus Hamiltonella defensa T5A Genome accession: NC_012751 Putative virulence/resistance : Virulence Product : D-arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 1780752 - 1781729 bp Length : 978 bp Strand : - Note : COG0794 DNA sequence : ATGATATTACTCAATCAGGTAAATTATCAACAAATTGCCAAAGCAGTATTAAAAATTGAATGTGCCGGTTTGGCTCAATT AGAGCAGTACATCAATGAAGATTTTGAAAAGGCTTGCGCCCACATTTTTTCTTGTCAGGGCAAGTTAGTGATCATGGGAA TGGGTAAATCTGGGCATATAGGTTGTAAAATAGCCGCTACCTTTGCCAGCACCGGAACACCGGCTTTTTTTGTTCATCCG AGTGAAGCAAACCATGGCGATCTTGGCATGATAAGTCAGGGTGACATTGTGTTAGCGATTTCAAATTCCGGTGAAGCGAA TGAAATTTTGTCCTTGATCCCTTTGTTAAAGCGCCAACATATTTTTTTGATTTGTATGACAGCAGATCCCAACAGCACGA TGGGAGAAGCGGCAGATATTCACCTGTGTATTAAAGTTCCTCAAGAAGCTTGCCCGTTGGGATTAGCGCCCACCACCAGC ACGACGGCTACTTTGGTGATGGGGGATGCGCTTGCGGTGGCCCTTTTGCAAGCTCGAGGATTTACTGAAAAAGACTTCGC ACGCTCTCATCCTGGGGGAAGGTTAGGCCGTAAGTTGCTGCTTCGGGTCAGTGATATGATGCACACTGGAAGCGACATTC CTTTCGTTTATTCAAATGCTTCTTTGCGTGATACTTTGTTGGAAATGACCCAAAAAAAGCTGGGTTTAACCGCGATTTGT GATCACAATATGAAAATTGAAGGGATTTTTACTGATGGGGATTTACGCCGAGTGTTTGATAAACAAATAGATTTGAACAA GGCGCACATTAATCACCTGATGACTTCCAATCCGGTACAGGTTAAACCTGGTTTATTGGCTGTGGAGGCCCTTAACTTAA TGCAATTACATCATATTACCGCTTTGTTGGTGTCTAAAAAAAGCCGTTTGGTGGGGGTGGTGCATATGCATGACATGCTG AGATCCGGAGTAATCTAA Protein sequence : MILLNQVNYQQIAKAVLKIECAGLAQLEQYINEDFEKACAHIFSCQGKLVIMGMGKSGHIGCKIAATFASTGTPAFFVHP SEANHGDLGMISQGDIVLAISNSGEANEILSLIPLLKRQHIFLICMTADPNSTMGEAADIHLCIKVPQEACPLGLAPTTS TTATLVMGDALAVALLQARGFTEKDFARSHPGGRLGRKLLLRVSDMMHTGSDIPFVYSNASLRDTLLEMTQKKLGLTAIC DHNMKIEGIFTDGDLRRVFDKQIDLNKAHINHLMTSNPVQVKPGLLAVEALNLMQLHHITALLVSKKSRLVGVVHMHDML RSGVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 4e-46 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 4e-46 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-45 | 43 |
