Gene Information

Name : aspC_2 (HDEF_1823)
Accession : YP_002924566.1
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Unknown
Product : aspartate aminotransferase, PLP-dependent - 2
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 1670073 - 1671335 bp
Length : 1263 bp
Strand : +
Note : COG0436

DNA sequence :
ATGCCTTCTACAGAAAAAGATAAAGAACCTTCAACGTTTTCAGAAAAGCGCTCTAATATTAAAAAATCTCATAAATTAGA
TGAGGTTTGTTACGATATTCGTGGCCCTGTCTTAAAAGAAGCGAAACGTCTTGAAGAAGAAGGGCATCATGTTTTAAAGC
TCCACATCGGCAACCCAGCGCCTTTTGGTTTCAATGCGCCCGAAGAAATTCTGGTCGATGTGATTCGTAATTTGCCGGCG
GCTCAAGGTTACTGTGATTCGAAAGGGCTGTATTCCGCTCGTAAAGCCATCATGCAACATTATCAAGCCCGAAACATGCA
CCATCTCACAGTAGAAGACATCTACATTGGGAATGGCGTTTCAGAGCTGATTGTTCAATCGATGCAGGCGTTATTAAATA
CTGGGGATGAAATGTTGATCCCTGCACCAGATTATCCCTTGTGGACGGCAGCGGTTTCTCTTTCAAATGGAAAAGCGATT
CATTATCTCTGTGATGAAGGCGCTGACTGGTTTCCAGATCTGTGCGATATTCGTCGTAAAATTACGTCTTCTACGAAAGG
GATTGTCATTATTAATCCCAATAATCCAACAGGATCAGTATATAGCAAAGCTTTATTATCAGAGATTGTAGAGATCGCCC
GTCAGCATAATTTTATCATTTTTGCAGATGAAATTTATGACAAAATTCTTTACGATGGCGCGCAGCATCATTCCATTGCG
GCTTTAGCGCCTGATTTGTTTACAGTGACGTTTAACGGATTATCGAAAACCTACAGAGTGGCAGGATTTCGACAAGGTTG
GATGGTATTACATGGGCCTAAAAAACACGCAAAGGACTATATTGAAGGTTTGGAGATGTTGGCCTCGATGCGTTTGTGTG
CCAATGTGCCGATGCAACATGCGATTCAGACGGCCATAGGGGGCTATCAAAGCATTAACGAATTGATTAAGCCCAAGGGC
CGTTTGTACGAACAAAGAGAAATGGCGTGGCATCTGATCAATGAAATTCCTGGATTATCTTGTACTAAACCCGCTGGCGC
ACTTTATATGTTCCCCAAATTCGATACAAAACGGTTTCATTTGTACGATGACCAAAAAATGGTGTTAGATCTTCTTTTAC
AAGAGAAAGTCTTATTAGTGCATGGAAGGGCTTTTCATTGGCCTGAGCCCGATCATGTGCGTATCGTTATTTTGCCCGCC
GTTAATGAATTGGCTCAGGGTATTAAAAAACTAAAACGATTTTTGTCTTCTTATCGTCAATAA

Protein sequence :
MPSTEKDKEPSTFSEKRSNIKKSHKLDEVCYDIRGPVLKEAKRLEEEGHHVLKLHIGNPAPFGFNAPEEILVDVIRNLPA
AQGYCDSKGLYSARKAIMQHYQARNMHHLTVEDIYIGNGVSELIVQSMQALLNTGDEMLIPAPDYPLWTAAVSLSNGKAI
HYLCDEGADWFPDLCDIRRKITSSTKGIVIINPNNPTGSVYSKALLSEIVEIARQHNFIIFADEIYDKILYDGAQHHSIA
ALAPDLFTVTFNGLSKTYRVAGFRQGWMVLHGPKKHAKDYIEGLEMLASMRLCANVPMQHAIQTAIGGYQSINELIKPKG
RLYEQREMAWHLINEIPGLSCTKPAGALYMFPKFDTKRFHLYDDQKMVLDLLLQEKVLLVHGRAFHWPEPDHVRIVILPA
VNELAQGIKKLKRFLSSYRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-114 56
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-114 56
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 5e-114 56
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-114 56