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Name : HDEF_1724 (HDEF_1724) Accession : YP_002924475.1 Strain : Candidatus Hamiltonella defensa T5A Genome accession: NC_012751 Putative virulence/resistance : Unknown Product : transcriptional accessory protein, RNA binding S1 domain protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1564045 - 1566351 bp Length : 2307 bp Strand : + Note : COG2183 DNA sequence : ATGATGAATTCATTAAACCATCTTCTTGCAGAAGAAATTAAAGCCGATCCCAAGCAGGTTTCTTGTGCAGTGCAGCTATT AGATGAAGGAAATACCGTTCCTTTTATCGCGCGTTATCGTAAAGAAATCACAGGGGGATTAGATGACACTCAACTTCGGT TATTAGAAAGCCGGTTGGGTTATTTGCGTGAATTAGCGGATCGTCGGCACAGCATTTTGAAGTCGATAGAGGAACAGGGA AAGCTCACCGATGCTCTAGCCAATGCGATTAACAGCACCCTAAACAAAGCAGAATTGGAAGACCTTTATTTGCCTTACAA ACCGAAGCGTCGTACCAAAGGGCAGATTGCGATCGAAGCAGGTCTTGAGTCTCTTGCCGAAACGTTATGGCAGGACCCGC ATCAAGATCCTGAGATCTTGGCGCAACAATATATCAATGCTGAAAAAAACATCACAGACACAAAATCCGCTTTAGAAGGC GCCCGTTATATTTTAATGGAGCGTTTTTCGGAAGACGCGGCATTGCTCTCAAAAGTGCGTCAATATCTTTGGAAAAATGC GCATTTCGTTTCTCAGGTTTTACCTGAGAAAGAAGAAGTAGGCGCTAAGTTTCGTGATTATTTTGATTATCAAGAGCCTA TTGCAAAAATTCCCTCACATCGTGCGCTCGCGCTATTTCGCGGGCGTAGTGAAGGTGTGCTTCAATTGGCTTTAAAGGTG CTTTCAGACGAAGATCCCAGCGAAGCGATTCTGGTGGAGCATTTTAACATTCGGCTTAATAATGCGCCTTCGGATCATTG GCGCAAAACCGTGTTGCAATGGGCGTGGCGTGTGAAAATAATCCCCCATCTTGAAACAGAGTTGATGGGGAATGTACGAG AAATGGCCCAAGAACAAGCCATTGAAGTCTTTGCACTCAATATGAAAGATTTGCTGATGGCGGCCCCTGCAGGGATGCGT CCCACGATGGGAATGGATCCTGGGTTAAGAACCGGGGTGAAAATTGCGGTAGTCGATGCCACAGGAAAATTGCTCGCGAC CGATACGGTGTATCCCCACACAGGTCAAGCAGCCAAAGCGGCTATCCGAGTGGCGCATTTGTGTCTTGAACATCAGGTAG AATGGGTTGCGATTGGGAACGGAACGGCATCCCGAGAAACAGAACGCTTTTATGCAGAAGTTCAAAAGCAGTATCCGGAA GTAAACAGTCAAAAAGTGATTGTCAGTGAAGCAGGGGCTTCCGTTTATTCCGCTTCTGAACTGGCGGCAGAAGAGTTTCC TGATTTAGATGTGTCTATTCGTGGTGCTGTCTCTATTGCTCGACGGCTACAGGATCCTCTGGCTGAATTAGTGAAAATCG ATCCAAAATCGATTGGGGTGGGCCAATATCAGCATGATGTCAGCCAAACGCAGTTGGCTAAAAAATTAACGGCCGTGGTG GAAGATTGTGTCAATTCAGTGGGCGTCGATCTCAATACCGCCTCCGTTCCATTACTGACTCGAGTGGCTGGCTTAAGCAC AAGCATGGCAAAAAATATCGTGAATTGGCGTGATCTTAACGGCCGTTTTATTCATCGGCAGCAATTACTCAACATTAACC AAGTCGGCCCAAAAGCGTTTGAACAAAGCGCGGGATTTTTGCGCATCAATAATGGAGACAATCCTTTAGATGCTTCCACT GTTCATCCTGAAGCCTATCCAGTAGTGGAAAATATTTTGAAATCGACGAAACAACACTTATCTCAATTGATGGGCAACAT CTCCATTTTAAGATCATTAAATCCAGAGAATTTTGTGAATGACCGATTTGGTCTCCCCACAGTGCGCGATATTTTGAAAG AGCTTGAAAAACCAGGGCGGGATCCGAGACCTGAGTTTAAAACGCCGATCTTTTCTGATGAGATAGAAACGCTCAAGGAT CTGATTCCAGGCATGATTTTACAGGGCTCTGTTACTAACATCACTCATTTTGGCGCTTTTATTGATATAGGTGTACATCA AGACGGCCTGGTGCATATCTCTTCCATGGCTAATCAATTTGTGACAGATCCTCATCAGCTGATCAAAACGGGCGACATTG TACAGGTTAAGGTGCTTTCTATTGATATGGAACGCAAGCGTATTGCTTTGAGCATGCGATTGGACGAACAGATCGCTGAT AAAAAAGACAAAACGGCTTCTGAAAATGAATCAAAAGAAAAGAGACTGACCAAAAAAAGACCTCTTAAAAATGCCCCCAT CAGTCATTTTAAGAATTCTGCACTCAGCGATGCGTTTGCTTCTGCGATAAAAAATAAACGTTCATAG Protein sequence : MMNSLNHLLAEEIKADPKQVSCAVQLLDEGNTVPFIARYRKEITGGLDDTQLRLLESRLGYLRELADRRHSILKSIEEQG KLTDALANAINSTLNKAELEDLYLPYKPKRRTKGQIAIEAGLESLAETLWQDPHQDPEILAQQYINAEKNITDTKSALEG ARYILMERFSEDAALLSKVRQYLWKNAHFVSQVLPEKEEVGAKFRDYFDYQEPIAKIPSHRALALFRGRSEGVLQLALKV LSDEDPSEAILVEHFNIRLNNAPSDHWRKTVLQWAWRVKIIPHLETELMGNVREMAQEQAIEVFALNMKDLLMAAPAGMR PTMGMDPGLRTGVKIAVVDATGKLLATDTVYPHTGQAAKAAIRVAHLCLEHQVEWVAIGNGTASRETERFYAEVQKQYPE VNSQKVIVSEAGASVYSASELAAEEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAKKLTAVV EDCVNSVGVDLNTASVPLLTRVAGLSTSMAKNIVNWRDLNGRFIHRQQLLNINQVGPKAFEQSAGFLRINNGDNPLDAST VHPEAYPVVENILKSTKQHLSQLMGNISILRSLNPENFVNDRFGLPTVRDILKELEKPGRDPRPEFKTPIFSDEIETLKD LIPGMILQGSVTNITHFGAFIDIGVHQDGLVHISSMANQFVTDPHQLIKTGDIVQVKVLSIDMERKRIALSMRLDEQIAD KKDKTASENESKEKRLTKKRPLKNAPISHFKNSALSDAFASAIKNKRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 57 |
