Gene Information

Name : P41 (HDEF_1650)
Accession : YP_002924408.1
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Unknown
Product : APSE-2 prophage; DEAD box helicase
Function : -
COG functional category : K : Transcription
COG ID : COG0553
EC number : -
Position : 1500475 - 1501857 bp
Length : 1383 bp
Strand : -
Note : COG0553

DNA sequence :
ATGAAAACCTTCACCCCTCGACCTTACCAAAATCTCATTATCAATCACCTACTCGATATCAAACGCTCAAATGTCTGGGC
GGGAATGGGGATGGGCAAAACAGCAGCAACCCTGACGGCATTAGAAAATCTCTATTTATCAGGCAGTGAAACCAAACCGA
CATTAGTGTTAGCCCCGTTACGGGTAGCGCAATCCACCTGGCCAGATGAAGCGCTTAAATGGAGCCACCTGCGTAATATT
GAAGTACAACCCATCATTGGAAACTCTAAAGCACGGATAGCGGCACTCAAAAATACCCATGCCAGCGTATTTACGGTCAA
TTATGACAATCTCGTCTGGCTGGTTGACATACTTGGTGACACTTGGCCTTTTGGCACAATTATTGCCGATGAGAGCACTC
GGTTGAAATCATTCCGGTTACGCAAAGGCGGTAAACGCACCGCAGCAATTGCCAAAATAGCGCATAAATCTGTTCATCGC
TGGGTAAATCTGACCGGTACGCCTTCACCTAATGGCCTGATGGACTTATGGGGGCAAGCGTGGTTTGTTGACCAGGGCGA
GCGCTTAGGCAGAACCCATAATGCGTTTACGTCTCGCTGGTTTAACCGTATTCAGTTGCCCGGGCAACAATGGAGTCGGT
TTGAGCCTTTAGGATTTGCGCATCTACAAATTCCGTTAGCGCTTAGCGATGTCACCTTATCCCTTAATGCGGCCGACTGG
TTTGATATCGAAGAACCGATACACAACGTTATCAACGTTACGCTACCTGCAAAAGCGCGAGCGCACTATCAGGCGATGGA
AAAAGAACTGTTTCTTGAATTGGGCGATAGCGCTATTGAAGCGTTAAATGCCGCGGCCAAAACAATAAAAACCTTACAAA
TTGCAGCAGGCGCTATTTATAGCGATGACAATCACAACTGGACAGCGATACACGATGCCAAAATTCAGGCGCTAGAGAGT
ATTGTTAATGAATCAGGAGGGACGCCAGTACTGGTCGCTTACCACTGGAAACATGACCTGGAGCGTTTATTAAAAGCCTT
TCCAAAAGGAAAAATGTTAGATGCTAACCCCCAAACCCTCACAAACTGGAATAGTGGCAAAATCCCCTTGCTCTTTGCTC
ACCCCGCAAGCTGTGGACACGGCTTAAATTTACAGGACGGCGGTAATATTCTGGTCTTTTTCTCCCACTGGTGGGACTTA
GAGCAGTACCAGCAAATTATCGAACGTATCGGCCCGACTCGTCAGGCACAAGCCGGACATAACCGCCCTGTCTTTATTCA
CCATATCGTTGCTAAAGATACCCTCGATGAAGTGGTCATGGAACGACGCAATTCAAAACGGGCAATACAGGATTTATTAC
TGGAAGCGATGAAAAGGAAATAA

Protein sequence :
MKTFTPRPYQNLIINHLLDIKRSNVWAGMGMGKTAATLTALENLYLSGSETKPTLVLAPLRVAQSTWPDEALKWSHLRNI
EVQPIIGNSKARIAALKNTHASVFTVNYDNLVWLVDILGDTWPFGTIIADESTRLKSFRLRKGGKRTAAIAKIAHKSVHR
WVNLTGTPSPNGLMDLWGQAWFVDQGERLGRTHNAFTSRWFNRIQLPGQQWSRFEPLGFAHLQIPLALSDVTLSLNAADW
FDIEEPIHNVINVTLPAKARAHYQAMEKELFLELGDSAIEALNAAAKTIKTLQIAAGAIYSDDNHNWTAIHDAKIQALES
IVNESGGTPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGHGLNLQDGGNILVFFSHWWDL
EQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVMERRNSKRAIQDLLLEAMKRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 4e-60 41