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Name : mutS (HDEF_1628) Accession : YP_002924388.1 Strain : Candidatus Hamiltonella defensa T5A Genome accession: NC_012751 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1480073 - 1482637 bp Length : 2565 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGGACAGTATCAATAAATGTGAATCTCATACCCCAATGATGCAGCAATACCTACGGCTTAAATCTGAACATCCAGAGGT ATTTTTGTTTTATCGAATGGGCGATTTTTATGAATTGTTTTATGACGATGCCAAACGCGCTTCCAGATTACTGGATATTT CATTGACTCAACGCGGGCAATCTGCAGGCACACCTATTCCCATGGCAGGCGTGCCCTATCATGTCATCGATAATTATTTA GCAAAACTTGTTCAATTAGGTGAATCTGCGGCTATTTGTGAACAGGTAGGAGATCCTTCAACGAGCAAAGGGCCTGTTGA ACGCAAGGTCGTTCGTATCGTGACGCCTGGCACCATCAGTGATGAAGCATTATTGCAGGAGAAACAAGATAATTTGCTGG CCGCTGTCTGGCAAGACAAACAAGGTTTGGGTTATGCCACCTTAGATATCAGTTCAGGGCGCTTTCGAGCAATGGAACCA AAAGACCTCGAAGCCTTAAAAACCGAATTACAACGTACTCATCCCTCTGAATTACTCTATCCCGAAACCTTTGAGCTCAT TGATTTGATTGAATCCCGTCAAGGTTTGCGTCGCCGCCCTTTATGGGAATTTGAGCTCGAAACGGCCCGTCAACAGCTCA ATCTACAATTTGGTACACAAGATTTAACGGGCTTTGGTGTAGAACAGGCACATTTGGCTTTAAGAGCAGCAGGCTGCTTA CTGCAATATGTCAAAGATACACAACGTACTTCGTTACCTCACATCAGAGAACTGATCCTGCAACACGAGGAAGACAATGT CACCATAGATGCTGCCAGCAGGCGTAATTTAGAATTAACTGAAAATTTATCAGGGGGTACAGAAAATACGCTGGCCAGTA TTTTGGATTGTACGGTGACGTCTATGGGGAGTCGAATGTTAAAGCGTTGGCTTCATATGCCCATAACAGATATGAGCACA CTGCATCATCGACAAGAAGCCATCAGGGTATTACAGCATGTGGCTTCTGATTTAAAACCGCTTTTACGTAAAGTCGGTGA TTTAGAACGTATTCTTGCCCGGCTCGCATTGCGTACCGCACGGCCAAGAGATTTAGCCAGAATGCGCTTGGCTTTTGAGC AGTTACCTGAAATTCATGACGTATTAAATACGTGTAAATCTCAACATTTAAAAAAATTGTTATCTGAAATAGGTCAATTT GATGCATTACTTGATTTACTGCGGCGAGCGATAGTAGACGTTCCCCCTGTATTAATACGGGATGGAGGCGTTATTGCCAC AGGATATAACGAAGAATTAGATAAATGGCGCGCACTATCTGATGGCGCTCATGATTATTTAAATGAACTCGAAATACGTG AGCGTCATGAGTTAAAACTAGATACCCTAAAAGTAGGATTTAACGCCATACATGGCTACTATATTCAGGTGAGTCGTGCC CAAAGTCATTTGATTCCCGCTCATTATGCTCGGCGTCAAACACTGAAAAACGTCGAACGCTACATCATTCCTGAATTAAA AGAATATGAAGATAAGGTGCTCACCTCCAAAGGAAAGGCATTAAGCATAGAAAAAGATCTCTATGAAGAAATTTTTGATT TGTTGCTACCTCATATTGCCTCATTACAAACGAGTTCTACCGCGCTGGCTGAATTAGATGTGCTTTCTAATCTGGCTGAA AGAGCAGATACACTCAACTATGTTTGCCCTGTTTTGACTGAAAAATCCGTGATTGAAATTACGGGTGGGCGCCATCCAGT GGTAGAGCAGGTTTCAAAACAACCTTTTATTGCCAACCCCATTTCTTTGTCTCCTGAGCGCCGGATGTTGATCATCACAG GTCCTAACATGGGTGGGAAAAGTACTTATATGCGCCAAACGGCACTGATTGTATTGTTGGCACACATCGGAAGTTTTGTA CCCGCTGACAAAGCCATCATTGGATCCGTTGATCGTATTTTTACTCGTATTGGCGCGGCAGATGATCTGGCTTCAGGCCG TTCTACCTTTATGGTTGAAATGACCGAAACCGCGAATATTTTACATAATGCCACGGAGAAAAGTTTGGTCTTGATGGATG AAATCGGGCGGGGGACTTCCACCTATGATGGCCTTTCTCTGGCTTGGGCTTGTGCCGAAAATTTGTCTATCCACATTAAA TCCATGACGCTTTTTGCCACTCATTATTTTGAATTGACAAGCTTACCAGAAAAAATCAACGGCATAGTGAACGTTCATCT TCAAGCTTTGGAGCAAGGAGATGAGATTGCGTTTATGCATTCTGTTCATGAAGGTGCTGCAAGCAAAAGTTATGGTTTAG CCGTCGCTGCTTTAGCGGGCGTGCCAAAGAAAGTCATCGATAGGGCTCGTCAAAGATTAGAGGAGCTGGAATTTACTTTA GAAGAGAACGGGCATACGAAACCATCCCTCCCTGCTTCAAAGCCTGTTTTTGAAAAAGAGTCTACGGATCATCCTGTTAT TCGTAAATTAAAAACCTTAAAGCCAGATACGATGACACCGTATGATGCATTACAGTGGATATATTATTTACAAAAGATGT TTTAA Protein sequence : MDSINKCESHTPMMQQYLRLKSEHPEVFLFYRMGDFYELFYDDAKRASRLLDISLTQRGQSAGTPIPMAGVPYHVIDNYL AKLVQLGESAAICEQVGDPSTSKGPVERKVVRIVTPGTISDEALLQEKQDNLLAAVWQDKQGLGYATLDISSGRFRAMEP KDLEALKTELQRTHPSELLYPETFELIDLIESRQGLRRRPLWEFELETARQQLNLQFGTQDLTGFGVEQAHLALRAAGCL LQYVKDTQRTSLPHIRELILQHEEDNVTIDAASRRNLELTENLSGGTENTLASILDCTVTSMGSRMLKRWLHMPITDMST LHHRQEAIRVLQHVASDLKPLLRKVGDLERILARLALRTARPRDLARMRLAFEQLPEIHDVLNTCKSQHLKKLLSEIGQF DALLDLLRRAIVDVPPVLIRDGGVIATGYNEELDKWRALSDGAHDYLNELEIRERHELKLDTLKVGFNAIHGYYIQVSRA QSHLIPAHYARRQTLKNVERYIIPELKEYEDKVLTSKGKALSIEKDLYEEIFDLLLPHIASLQTSSTALAELDVLSNLAE RADTLNYVCPVLTEKSVIEITGGRHPVVEQVSKQPFIANPISLSPERRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFV PADKAIIGSVDRIFTRIGAADDLASGRSTFMVEMTETANILHNATEKSLVLMDEIGRGTSTYDGLSLAWACAENLSIHIK SMTLFATHYFELTSLPEKINGIVNVHLQALEQGDEIAFMHSVHEGAASKSYGLAVAALAGVPKKVIDRARQRLEELEFTL EENGHTKPSLPASKPVFEKESTDHPVIRKLKTLKPDTMTPYDALQWIYYLQKMF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 68 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_002924388.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 73 |
