|
Name : tktB (HDEF_1525) Accession : YP_002924296.1 Strain : Candidatus Hamiltonella defensa T5A Genome accession: NC_012751 Putative virulence/resistance : Unknown Product : transketolase 2, thiamin-binding, isozyme Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 1400899 - 1402908 bp Length : 2010 bp Strand : + Note : COG0021 DNA sequence : ATGATTTTTCATCAAACCCTCTCTAGAAAAGAATGCGCTAATGCCATTCGCGCGCTCAGTATAGATGCGGTACAAAAAGC AGGATCAGGGCATCCAGGTGCCCCGATGGGTATGGCAGATATCGCCCAGGTGTTATGGTGTGATTATTTAAAACACAATC CACGACACCCTGATTGGTGTGACAGAGATCGCTTTGTTTTATCGAACGGGCATGCTTCCATGTTGCTTTATAGCCTGCTG CATCTCACAGGCTACGATCTTTCGATAGAAGAAATAAAAAATTTCAGACAACTACATTCTAAAACACCAGGGCACCCAGA ATATGGCTATACGCCTGGGGTAGAAACCACCACAGGCCCCTTAGGGCAAGGGATTGCAAATGCCGTGGGTTTGGCGATTG CAGAGCGAACCCTGGGTGCCCAGTTTAATCGTCATGGATACCCTATAGTGGATCATCATACCTATGCTTTTATGGGAGAT GGATGCATGATGGAAGGGATTTCTCATGAGGTCTGTTCATTAGCGGGCACGTTACAATTAGGGAAATTGATTGTCTTTTA CGATGACAACGATATTTCTATTGATGGTCATGTGAGCGGATGGTTTACGGATAATACGGCCGGGCGTTTCATGGCTTATG GTTGGCATGTCATTGACACAATAGATGGCCATCATCCTGAGTCGATTAAATCGGCTATTGAAGAAGCACGTTCTGTTCCA GACAAACCCTCGTTATTGATTTGTAAAACCACCATTGGTTATGGTTCGCCAAACAAAGCCGGCAGTCATGATGTGCACGG CGCGCCTTTAGGTACCGCTGAGGTTGAGGCCGTGCGAGCAGAGCTTGGGTGGCCATATCCTCCTTTTGAGATCCCCAGTG AGATATATCAGGCTTGGGATGCAAAAGAAAAAGGCCAATCGCAACAAGCGCGTTGGGACCAATTGTTTTCAGATTATGCC AAAGCGTACCCCGAGCTGGCCTTAGAATTTAAGCGCCGCATCCAGGGTGCATTACCGGCTGATTTTGAGCCTCAATCCCA TCAATTTATTCAAAATTTACAAGCGAATCCGGCGAACATTGCGAGCCGTAAAGCTTCCCAAAACACTTTAGAGGCTTTTG GCCAAATATTACCAGAATTGATGGGGGGATCTGCCGATTTAGCGCCCAGTAATTTAACCCTTTGGTCTGGTTCCAAATCT ATCAAAACAGATCCCATGGGCAATTACATTCATTACGGTGTCAGAGAATTTGGCATGTCGGCCATCATGAACGGCATCGC GCTTCATAGTGGCTTTATTCCTTATGGCGCGACCTTTTTGATGTTTGTTGAATATGCACGAAACGCAGTGCGTATGGCGG CTTTGATGAAAATTCGCTGTCTTTTCGTTTACACCCATGATTCTATTGGATTAGGAGAAGACGGCCCGACTCATCAACCG GTGGAACAAATGGCCAGCTTACGTGTCACACCCAATTTAAGTGTATGGCGCCCTTGCGATCAGGTGGAATCGGCCGTCGC ATGGCAATTGAGCGTCCAACGGACAGAAGGCCCCAGTGTGCTGATTTTTTCTCGCCAAAATTTACAACAACAATCAAGAA CACAAAAACAATTAGACAGCATCAAAAAAGGGGGATACATCCTCAAAGATGCTGAAGGTCAGCCTGAATTAATTTTGATG GCAACAGGATCTGAAGTGAGTTTAGCCATCTCGGCAGCTGAACGATTAACTGAAATGGGTCATAAAGTGCGAGTGGTTTC TATGCCTTCCACTGATCTGTTTGATCAACAGACTGCAAAGTATCGCGATGAGGTTTTACCTGGCAAAGTGTCTGCTCGAT TAGCCATAGAAGCGGGTATTGCCGATTTTTGGTACAAATATGTAGGCCTGAAAGGTGACGTCATTGGCATGAGCAGTTTT GGCGAATCGGCACCCGCCGAGTGTTTGTTTAAAGCATTTGGTTTCACGATTGATCATGTGGTTGCCAAAGCAAAAGCGCT TTTACAATAA Protein sequence : MIFHQTLSRKECANAIRALSIDAVQKAGSGHPGAPMGMADIAQVLWCDYLKHNPRHPDWCDRDRFVLSNGHASMLLYSLL HLTGYDLSIEEIKNFRQLHSKTPGHPEYGYTPGVETTTGPLGQGIANAVGLAIAERTLGAQFNRHGYPIVDHHTYAFMGD GCMMEGISHEVCSLAGTLQLGKLIVFYDDNDISIDGHVSGWFTDNTAGRFMAYGWHVIDTIDGHHPESIKSAIEEARSVP DKPSLLICKTTIGYGSPNKAGSHDVHGAPLGTAEVEAVRAELGWPYPPFEIPSEIYQAWDAKEKGQSQQARWDQLFSDYA KAYPELALEFKRRIQGALPADFEPQSHQFIQNLQANPANIASRKASQNTLEAFGQILPELMGGSADLAPSNLTLWSGSKS IKTDPMGNYIHYGVREFGMSAIMNGIALHSGFIPYGATFLMFVEYARNAVRMAALMKIRCLFVYTHDSIGLGEDGPTHQP VEQMASLRVTPNLSVWRPCDQVESAVAWQLSVQRTEGPSVLIFSRQNLQQQSRTQKQLDSIKKGGYILKDAEGQPELILM ATGSEVSLAISAAERLTEMGHKVRVVSMPSTDLFDQQTAKYRDEVLPGKVSARLAIEAGIADFWYKYVGLKGDVIGMSSF GESAPAECLFKAFGFTIDHVVAKAKALLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 77 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 67 |
