|
Name : spaQ (HDEF_1507) Accession : YP_002924279.1 Strain : Candidatus Hamiltonella defensa T5A Genome accession: NC_012751 Putative virulence/resistance : Virulence Product : type III needle complex export protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4794 EC number : - Position : 1380673 - 1380933 bp Length : 261 bp Strand : + Note : COG4794 DNA sequence : ATGAATGATTTGGTATTTGCAGGTAACAAAGCACTTTATTTAATTTTAACGTTAAGCGCGATTCCTGTTGCTGTGGCAAC AGCAGTAGGGCTGATCATTGGCCTGATTCAAACTGTCACACAGCTACAGGAACAAACCTTGCCGTTTGGAATCAAACTAT TAAGTGTCTCTTTATGTCTTTTTTTATTAGCAGGTTGGTATGGAGACACCCTCTTGGCTTATGCACGTGAAGTGATTGGT ATCGCATTGCGACGGCCATAA Protein sequence : MNDLVFAGNKALYLILTLSAIPVAVATAVGLIIGLIQTVTQLQEQTLPFGIKLLSVSLCLFLLAGWYGDTLLAYAREVIG IALRRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaQ | YP_217808.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 1e-19 | 72 |
| spaQ | NP_457283.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 1e-19 | 72 |
| spaQ | NP_806492.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 1e-19 | 72 |
| spaQ | NP_461810.1 | needle complex export protein | Virulence | SPI-1 | Protein | 1e-19 | 72 |
| spaQ | AAS66866.1 | SpaQ | Not tested | SSR-2 | Protein | 1e-19 | 71 |
| epaQ | AAZ31292.1 | EpaQ | Virulence | ETT2 | Protein | 1e-18 | 66 |
| ECs3724 | NP_311751.1 | EpaQ | Not tested | LIM | Protein | 2e-18 | 65 |
| ysaS | AAS66847.1 | YsaS | Not tested | SSR-1 | Protein | 2e-13 | 53 |
| hrcS | AAT96263.1 | HrcS | Virulence | S-PAI | Protein | 9e-07 | 50 |
| hrcS | AAT96304.1 | HrcS | Virulence | S-PAI | Protein | 9e-07 | 50 |
| hrcS | AAT96344.1 | HrcS | Virulence | S-PAI | Protein | 9e-07 | 50 |
| lscS | AAO18039.1 | LscS | Virulence | TTSS locus | Protein | 3e-07 | 48 |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 1e-07 | 47 |
| hrcS | ABA47280.1 | HrcS | Virulence | S-PAI | Protein | 3e-06 | 47 |
| hrcS | AAT96147.1 | HrcS | Virulence | T-PAI | Protein | 9e-08 | 44 |
| hrcS | AAT96201.1 | HrcS | Virulence | T-PAI | Protein | 9e-08 | 44 |
| hrcS | ABQ88360.1 | HrcS | Virulence | Hrp PAI | Protein | 6e-05 | 43 |
| hrpO | AAB05076.1 | HrpO | Virulence | Hrp PAI | Protein | 6e-05 | 43 |
| escS | AFO66341.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 5e-05 | 41 |
| escS | AFO66401.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 5e-05 | 41 |
| hrcS | AAG33885.1 | HrcS | Virulence | Hrp PAI | Protein | 6e-08 | 41 |
| hrcS | NP_791221.1 | type III secretion protein HrcS | Virulence | Hrp PAI | Protein | 9e-08 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spaQ | YP_002924279.1 | type III needle complex export protein | VFG0550 | Protein | 3e-20 | 72 |
| spaQ | YP_002924279.1 | type III needle complex export protein | VFG1013 | Protein | 9e-18 | 65 |
| spaQ | YP_002924279.1 | type III needle complex export protein | VFG1772 | Protein | 1e-17 | 63 |
| spaQ | YP_002924279.1 | type III needle complex export protein | VFG2454 | Protein | 1e-14 | 62 |
| spaQ | YP_002924279.1 | type III needle complex export protein | VFG0395 | Protein | 3e-08 | 46 |
| spaQ | YP_002924279.1 | type III needle complex export protein | VFG0187 | Protein | 1e-04 | 46 |
| spaQ | YP_002924279.1 | type III needle complex export protein | VFG0043 | Protein | 5e-07 | 42 |
