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Name : ssaD (HDEF_0146) Accession : YP_002923067.1 Strain : Candidatus Hamiltonella defensa T5A Genome accession: NC_012751 Putative virulence/resistance : Virulence Product : type III secretion apparatus protein Function : - COG functional category : - COG ID : - EC number : - Position : 148820 - 150058 bp Length : 1239 bp Strand : - Note : - DNA sequence : ATGAAAGCACAGTTTAAAGTACGCTTATTGAATGGCATATTGAATGGCCGTGAAATTTTATTGCCAGAAGGCATATTTAC TTTCGGAGAGCAGGATTGCGATATCTTTTTAGTATTGCCAGATGCTCATATCCTGACACTCAAAATCGAAGAAAATGAAA TTTTCATGGAGGCTCAATGTCAGGTTTGGGTCAATGGTGTTGCGTTTGATTTAAACCATCCTTTGCCGCTTCATCAGGTG ATTGAAGCAGATGGCATTTATATGCTCTTGGGAGCACATGACGATACTCTTACTGCGATGCCTTTACCAAGGCGGGTTGA TCAAAGACCCTCTCTATGGTTATCAGTATTAGCGCTCATTTTATTATTCACTTTTTTAGGGGGAGTGTATTGGCTTTCTT CTAATAAGAATAGGCTTTTAAAGCACAGTGAAAAGAAAATGATTGAATATCAATCGACAAACATCGCAAGTCAACTGGCA AAGAAATTAAACACATTAAAATTAAAAGAAGTGAAGACTATTTGGCAGCCTGATGGAAGCGTCATTTTAAATGGATATTG CCAAAATTCTGATTTAATAAAAAATGTACAGAACTTTTTGTTGGCGAATGAGATCGCATATCACAATAATCTGATCTGCG ATGATCATTTAATGTTAAGTGTAAAAAACGTTTTCCTTCAATTTGGTTATCCTGACGTTGAGGTCAAGCAAGGTAGTCTT CCTAACACGTTGGTAATTCATGGATTAATTCAATCAGGGCCAGAATGGGCAAAAGTGCAGGAAGCCCTTTCATCTATTGC AGGGTTAAAAGGATGGAGCGTTGTTAACAATCAGGGCGAACAAATTAAGTTTTTGATACAACAATTAATGGAATCGGATC TGCTGGGTTATTTAAGCATGGAGCAAAATAAACAAAATATTGTGATGAGCGGTTGGCTTTCTTCTGAACAGCAAAAAAAA TTAAATGAAATGTTAGACAATATTCATCAAAAAGATCCCACTTTTCCCAAAGTCATTTATCAAAATATTCCTGTATTCGA TCAATCTGCACAGATATTACCCTCTCCTGTCATGAGCTACGGTGGTAATATTAAATCTGTATTTATTGATTTAGAAAACG GACAGCGTTTACAAGTAGGCACAGTATTATCGAATGGATATAAAGTTATATTCATAGGCAAGCAAGGAATACAACTCATC AAAGGAAATGACATGATACATATTCCTTTAAATTTTTAA Protein sequence : MKAQFKVRLLNGILNGREILLPEGIFTFGEQDCDIFLVLPDAHILTLKIEENEIFMEAQCQVWVNGVAFDLNHPLPLHQV IEADGIYMLLGAHDDTLTAMPLPRRVDQRPSLWLSVLALILLFTFLGGVYWLSSNKNRLLKHSEKKMIEYQSTNIASQLA KKLNTLKLKEVKTIWQPDGSVILNGYCQNSDLIKNVQNFLLANEIAYHNNLICDDHLMLSVKNVFLQFGYPDVEVKQGSL PNTLVIHGLIQSGPEWAKVQEALSSIAGLKGWSVVNNQGEQIKFLIQQLMESDLLGYLSMEQNKQNIVMSGWLSSEQQKK LNEMLDNIHQKDPTFPKVIYQNIPVFDQSAQILPSPVMSYGGNIKSVFIDLENGQRLQVGTVLSNGYKVIFIGKQGIQLI KGNDMIHIPLNF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0258 | YP_002345338.1 | type-III secretion protein | Virulence | Not named | Protein | 5e-88 | 44 |
